RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SNPHO15079 494 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 GLSO94925 669 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 UNC5CO95185 931 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 DCTP40126 519 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 MAGEA5P43359 124 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 CRISP3P54108 245 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 FOXK1P85037 733 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 FOXO1Q12778 655 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 ART3Q13508 389 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 RGNQ15493 299 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 TRMT5Q32P41 509 aaKnown RBP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 ARHGAP11AQ6P4F7 1023 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 MTERF4Q7Z6M4 381 aaKnown RBP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 TMEM251Q8N6I4 163 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 PMM1Q92871 262 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 AURKBQ96GD4 344 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 GNRHR2Q96P88 292 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 CGREF1Q99674 301 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 BARD1Q99728 777 aaKnown RBP12.89□□□□□ -0.35
SSBP3-208ENST00000444533 DEFB127Q9H1M4 99 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 ARMC7Q9H6L4 198 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 C15orf41Q9Y2V0 281 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 KCNE3Q9Y6H6 103 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 KALRNO60229 2985 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 PINLYPA6NC86 204 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ALG1L2C9J202 215 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 NDUFAB1O14561 156 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 FADS1O60427 444 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 GUSBP08236 651 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ETFAP13804 333 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ABOP16442 354 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 MSX1P28360 303 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 GANABQ14697 944 aaKnown RBP12.88□□□□□ -0.35
SSBP3-208ENST00000444533 IGFBP7Q16270 282 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 CYP51A1Q16850 503 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF630Q2M218 657 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-208ENST00000444533 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 COX20Q5RI15 118 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 GCNT6Q5T4J0 391 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-208ENST00000444533 REP15Q6BDI9 236 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 LRRC74BQ6ZQY2 392 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 PIGWQ7Z7B1 504 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 MARCH3Q86UD3 253 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 PEX5LQ8IYB4 626 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 EID3Q8N140 333 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF619Q8N2I2 560 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 METTL25Q8N6Q8 603 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 CCDC197Q8NCU1 140 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 OR4C3Q8NH37 302 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 PHOSPHO1Q8TCT1 267 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 DUSP19Q8WTR2 217 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF350Q9GZX5 532 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 SERHL2Q9H4I8 314 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF703Q9H7S9 590 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-208ENST00000444533 MTHFD2LQ9H903 347 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-208ENST00000444533 EFCAB1Q9HAE3 211 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 PROK2Q9HC23 129 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 SLC52A3Q9NQ40 469 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 SLC6A13Q9NSD5 602 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 VAPAQ9P0L0 249 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 MKLN1Q9UL63 735 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 DTNAQ9Y4J8 743 aa12.88□□□□□ -0.35
SSBP3-208ENST00000444533 C15orf38-AP3S2A0A0A6YYH1 394 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 SUSD5O60279 629 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 HCN1O60741 890 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 PDE9AO76083 593 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 H6PDO95479 791 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 NUDT14O95848 222 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 BCHEP06276 602 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 COX4I1P13073 169 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 PLA2G2AP14555 144 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 SLC6A2P23975 617 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 MST1P26927 711 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 PTPN6P29350 595 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 KRT73Q86Y46 540 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 ECSITQ9BQ95 431 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 ZDHHC11Q9H8X9 412 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 SLAMF8Q9P0V8 285 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 STOML1Q9UBI4 398 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF232Q9UNY5 417 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 AP3M1Q9Y2T2 418 aa12.87□□□□□ -0.35
SSBP3-208ENST00000444533 LRRC3CA6NJW4 275 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 PRRG2O14669 202 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms