RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 A0A1B0GTH9 108 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 A0A1W2PP18 115 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 TMEM247A6NEH6 219 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 ALG1L2C9J202 215 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 ANGPT2O15123 496 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 NDUFB5O43674 189 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 ANGPTL1O95841 491 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 GSNP06396 782 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 OR12D1P0DN82 309 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 MSX1P28360 303 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 SRD5A2P31213 254 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 DCTP40126 519 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 CA7P43166 264 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 ATP12AP54707 1039 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 DSCR4P56555 118 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 RPS26P62854 115 aaKnown RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 GANABQ14697 944 aaKnown RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 MAPRE2Q15555 327 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 CCNJQ5T5M9 372 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 WLSQ5T9L3 541 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 HEPHL1Q6MZM0 1159 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 CGB2Q6NT52 195 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 TNFAIP8L2Q6P589 184 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 GALNT10Q86SR1 603 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 MARCH3Q86UD3 253 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 RNF130Q86XS8 419 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 WDSUB1Q8N9V3 476 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 OR4C3Q8NH37 302 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 NEIL3Q8TAT5 605 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 FAM57AQ8TBR7 257 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 ZFP90Q8TF47 636 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 XAGE5Q8WWM1 108 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 RELTQ969Z4 430 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 SDF2Q99470 211 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 NMUR2Q9GZQ4 415 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 PAIP1Q9H074 479 aaKnown RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 SERHL2Q9H4I8 314 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 TPT1P8Q9HAU6 139 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 SUCOQ9UBS9 1254 aaKnown RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 LEF1Q9UJU2 399 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 DKKL1Q9UK85 242 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 NDUFAF1Q9Y375 327 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 SVILO95425 2214 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 NBASA2RRP1 2371 aa9.88□□□□□ -0.83
HDAC6-211ENST00000443563 FASNP49327 2511 aaKnown RBP9.88□□□□□ -0.83
HDAC6-211ENST00000443563 LRRTM2O43300 516 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 WISP2O76076 250 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 AGFG2O95081 481 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 TPOP07202 933 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 SNRPB2P08579 225 aaKnown RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 CELA3AP09093 270 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 ESRRAP11474 423 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 CAPN3P20807 821 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 ADSLP30566 484 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 CRATP43155 626 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 HSF1Q00613 529 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 FADDQ13158 208 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 UBAP2LQ14157 1087 aaKnown RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 GNA13Q14344 377 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 SF3B4Q15427 424 aaKnown RBP eCLIP9.87□□□□□ -0.838e-7■■■■□ 21.6
HDAC6-211ENST00000443563 GPAT3Q53EU6 434 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 LRIF1Q5T3J3 769 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 C1QL3Q5VWW1 255 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 SLC2A7Q6PXP3 512 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 DNAJC14Q6Y2X3 702 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 CPLX4Q7Z7G2 160 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 FADS6Q8N9I5 356 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 FAM83FQ8NEG4 500 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 OR14L1PQ8NHC6 308 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 DUSP19Q8WTR2 217 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 PMM1Q92871 262 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 ROPN1LQ96C74 230 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 TRNT1Q96Q11 434 aaKnown RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 TP63Q9H3D4 680 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 SLC52A3Q9NQ40 469 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 FBXO34Q9NWN3 711 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 CALML5Q9NZT1 146 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 FLRT3Q9NZU0 649 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 P2RX2Q9UBL9 471 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 ACAD8Q9UKU7 415 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 CORO2BQ9UQ03 480 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 WDR45Q9Y484 360 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 PCDHB14Q9Y5E9 798 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 KCNE3Q9Y6H6 103 aa9.87□□□□□ -0.83
HDAC6-211ENST00000443563 UTP20O75691 2785 aaKnown RBP9.87□□□□□ -0.83
HDAC6-211ENST00000443563 GTF3C1Q12789 2109 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 A0A087WZY1 265 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 IGLV3-32A0A0A0MS00 114 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 C15orf38-AP3S2A0A0A6YYH1 394 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CLEC18AA5D8T8 446 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 EVPLLA8MZ36 301 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 FAM47E-STBD1D6RA91 191 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 NPIPA2E9PIF3 369 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 NPIPA3F8WFD2 350 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 LINC01387J3KSC0 135 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 GTPBP1O00178 669 aaKnown RBP9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CLIC1O00299 241 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms