RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SGK494L7N484 410 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SYT5O00445 386 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 NDUFS4O43181 175 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DNAJB6O75190 326 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SERPINB7O75635 380 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LRATO95237 230 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ETHE1O95571 254 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 AGR2O95994 175 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MT-ND2P03891 347 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GBAP04062 536 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GUSBP08236 651 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GSTM3P21266 225 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 AGXTP21549 392 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 AHRP35869 848 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 YAP1P46937 504 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 BCAP31P51572 246 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 IST1P53990 364 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 EPHA4P54764 986 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RPS3AP61247 264 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RPS15P62841 145 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 HBA1P69905 142 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ACY1Q03154 408 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 C2orf80Q0P641 193 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 AQP6Q13520 282 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SPCS2Q15005 226 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 NCF4Q15080 339 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 AGAP7PQ5VUJ5 663 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SLX4IPQ5VYV7 408 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF770Q6IQ21 691 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FAM180BQ6P0A1 224 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ADCK1Q86TW2 530 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 KRT73Q86Y46 540 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SAMD14Q8IZD0 417 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CENPSQ8N2Z9 138 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MFSD4AQ8N468 514 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OR5T3Q8NGG3 340 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OR2A1Q8NGT9 310 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OR9A4Q8NGU2 314 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 THAP3Q8WTV1 239 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RGMAQ96B86 450 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MTERF1Q99551 399 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 COPS4Q9BT78 406 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FAIM2Q9BWQ8 316 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PRRG3Q9BZD7 231 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SPNS1Q9H2V7 528 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TRIM45Q9H8W5 580 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LIN28AQ9H9Z2 209 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 C3orf14Q9HBI5 128 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SLC6A20Q9NP91 592 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MIEF1Q9NQG6 463 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MRPS18AQ9NVS2 196 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ANKMY1Q9P2S6 941 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ERVK-18Q9QC07 812 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 RNF6Q9Y252 685 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CFL2Q9Y281 166 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM184BQ9Y519 407 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MAGED1Q9Y5V3 778 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PEX16Q9Y5Y5 336 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MAST4O15021 2626 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 COL5A1P20908 1838 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 A0A087WV48 116 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 IGKV1-8A0A0C4DH67 115 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ANKDD1BA6NHY2 528 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SNTNA6NMZ2 147 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 H0YGG7 62 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TMX2-CTNND1H3BSU7 103 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PDPK1O15530 556 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 P2RX6O15547 441 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PRKNO60260 465 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LCMT2O60294 686 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 B4GALT2O60909 372 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CPNE3O75131 537 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CNOT3O75175 753 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 INMTO95050 263 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 GADD45GO95257 159 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PTTG1O95997 202 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 OSMP13725 252 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CD247P20963 164 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TPP2P29144 1249 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PKLRP30613 574 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 BSGP35613 385 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CHI3L1P36222 383 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MASP1P48740 699 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 KHKP50053 298 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ARF3P61204 181 aaPredicted RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TMED1Q13445 227 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DNASE1L3Q13609 305 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ATP1A4Q13733 1029 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 CEBPEQ15744 281 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 ADPRMQ3LIE5 342 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 DEFB134Q4QY38 66 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 C12orf73Q69YU5 71 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FCRLBQ6BAA4 426 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 FCRL6Q6DN72 434 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TSEN54Q7Z6J9 526 aaKnown RBP4.43□□□□□ -1.7
EDEM3-203ENST00000439962 IGFN1Q86VF2 1251 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 HS3ST5Q8IZT8 346 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 LGI4Q8N135 537 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 SLC43A2Q8N370 569 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms