RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 KLHL26Q53HC5 615 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 EIPR1Q53HC9 387 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 TBCELQ5QJ74 424 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 RNF220Q5VTB9 566 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 B3GNTL1Q67FW5 361 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 FCRLBQ6BAA4 426 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 DHRS4L2Q6PKH6 230 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 C16orf47Q6ZP98 133 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 ARMC8Q8IUR7 673 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 AQP12AQ8IXF9 295 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 PRR22Q8IZ63 422 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 BEST3Q8N1M1 668 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 AMER2Q8N7J2 671 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 LZICQ8WZA0 190 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 TM9SF4Q92544 642 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 FAM162AQ96A26 154 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 EFHD2Q96C19 240 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 LRGUKQ96M69 825 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 SMAD5Q99717 465 aaKnown RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 UTP23Q9BRU9 249 aaKnown RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 PCDHAC1Q9H158 963 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 ARMC7Q9H6L4 198 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 ZNF552Q9H707 407 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 ZBTB20Q9HC78 741 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 CPNE5Q9HCH3 593 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 SH2D2AQ9NP31 389 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 DCAF13Q9NV06 445 aaKnown RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 FBXO34Q9NWN3 711 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 HPF1Q9NWY4 346 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 BAG5Q9UL15 447 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 MKLN1Q9UL63 735 aa11.66□□□□□ -0.54
SCLT1-202ENST00000439369 SAMD4AQ9UPU9 718 aaKnown RBP11.66□□□□□ -0.54
SCLT1-202ENST00000439369 APC2O95996 2303 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 CEP295Q9C0D2 2601 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 ALG1L2C9J202 215 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 H3BNH8 94 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 M0QX08 132 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 SYT5O00445 386 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 SCDO00767 359 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 FADS1O60427 444 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 MAN1A2O60476 641 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 ICOSLGO75144 302 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 UGT2B17O75795 530 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 PABPC4LP0CB38 370 aaKnown RBP11.65□□□□□ -0.54
SCLT1-202ENST00000439369 NID1P14543 1247 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 HPGDP15428 266 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 AQP1P29972 269 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 RFX3P48380 749 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 MS4A2Q01362 244 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 GPR68Q15743 365 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 CYBRD1Q53TN4 286 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 RPS26P11Q5JNZ5 115 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-202ENST00000439369 C1orf146Q5VVC0 180 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 CBLL1Q75N03 491 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 EIF3MQ7L2H7 374 aaKnown RBP11.65□□□□□ -0.54
SCLT1-202ENST00000439369 ZAR1Q86SH2 424 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 MISPQ8IVT2 679 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 CYP4Z2PQ8N1L4 340 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 FDCSPQ8NFU4 85 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 OR4C3Q8NH37 302 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 OR52P1PQ8NH57 321 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 SLC26A7Q8TE54 656 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 PAQR8Q8TEZ7 354 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 WDR60Q8WVS4 1066 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 HAS2Q92819 552 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 TAMM41Q96BW9 452 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 PINK1Q9BXM7 581 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 TIMMDC1Q9NPL8 285 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-202ENST00000439369 SEC14L3Q9UDX4 400 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 ZNF443Q9Y2A4 671 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-202ENST00000439369 SLC35A3Q9Y2D2 325 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 DTNAQ9Y4J8 743 aa11.65□□□□□ -0.54
SCLT1-202ENST00000439369 NCOR2Q9Y618 2525 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 CPAMD8Q8IZJ3 1885 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 OR5H15A6NDH6 313 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 PRAMEF25A6NGN4 478 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 A6NL46 340 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 MKRN2OSH3BPM6 223 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 SORBS2O94875 1100 aaKnown RBP11.64□□□□□ -0.55
SCLT1-202ENST00000439369 OXSR1O95747 527 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-202ENST00000439369 SERPINA1P01009 418 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 GPIP06744 558 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 UMPSP11172 480 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 NCK1P16333 377 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 IL7RP16871 459 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 ATP6V1B2P21281 511 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 EVI2BP34910 448 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 MSX2P35548 267 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-202ENST00000439369 KCNJ5P48544 419 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 CRYBA2P53672 197 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 FBXW4P57775 412 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 SELENOWP63302 87 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 TUBA3CQ13748 450 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 FGFBP1Q14512 234 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 GRAMD1BQ3KR37 738 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 LRRC23Q53EV4 343 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF311Q5JNZ3 666 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms