RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 HSDL1Q3SXM5 330 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 ZNF506Q5JVG8 444 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MARC1Q5VT66 337 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 EMBQ6PCB8 327 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 TRMT11Q7Z4G4 463 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 CPEB2Q7Z5Q1 589 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRPF39Q86UA1 669 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 CLYBLQ8N0X4 340 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 Q8NFD4 153 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR4C15Q8NGM1 316 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 ADAMTS16Q8TE57 1224 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 NEDD4LQ96PU5 975 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 FEVQ99581 238 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 CPNE1Q99829 537 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 B9D2Q9BPU9 175 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 ACTL8Q9H568 366 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 NOL11Q9H8H0 719 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 ECT2Q9H8V3 914 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 PLEKHF2Q9H8W4 249 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MARCH7Q9H992 704 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MARCH5Q9NX47 278 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 HAO2Q9NYQ3 351 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MRPL15Q9P015 296 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 CPSF2Q9P2I0 782 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 TXNDC16Q9P2K2 825 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 TBC1D29Q9UFV1 150 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 FBXL4Q9UKA2 621 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MALRD1Q5VYJ5 2156 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 ALPK2Q86TB3 2170 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 CCDC171Q6TFL3 1326 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 hCG_1807616A0A1W2PRN6 198 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 ARGFXA6NJG6 315 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 ADAM12O43184 909 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 FIBPO43427 364 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 C9P02748 559 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 NR2F1P10589 423 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 F3P13726 295 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 PORP16435 677 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 IGFBP5P24593 272 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 GIFP27352 417 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 CALML3P27482 149 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 SFTPDP35247 375 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 NNMTP40261 264 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 EIF2DP41214 584 aaKnown RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 OTUD4Q01804 1114 aaKnown RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 STK4Q13043 487 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 PDGFRLQ15198 375 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 PSMD5Q16401 504 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 TTC31Q49AM3 519 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 CFAP58Q5T655 872 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 C6orf163Q5TEZ5 329 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 GPR139Q6DWJ6 353 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 C16orf54Q6UWD8 224 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 DNAAF5Q86Y56 855 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 CCDC60Q8IWA6 550 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 CNPY4Q8N129 248 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC25A45Q8N413 288 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 POMGNT2Q8NAT1 580 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 LEMD2Q8NC56 503 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 KIAA0895Q8NCT3 520 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 FDCSPQ8NFU4 85 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR5M9Q8NGP3 310 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 URGCPQ8TCY9 931 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 LMX1AQ8TE12 382 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 NABP1Q96AH0 204 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMEM159Q96B96 161 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 BIRC7Q96CA5 298 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 ZNF396Q96N95 335 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 NDNQ99608 321 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMEM175Q9BSA9 504 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 NUP58Q9BVL2 599 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 ASB8Q9H765 288 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 KCNJ16Q9NPI9 418 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 CUTCQ9NTM9 273 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 PDP1Q9P0J1 537 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 PPIEQ9UNP9 301 aaKnown RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 L3MBTL1Q9Y468 752 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 U3KQA8 63 aa1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 ROCK2O75116 1388 aaKnown RBP1.97□□□□□ -2.09
HMGB1P18-201ENST00000438801 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.09
HMGB1P18-201ENST00000438801 MPDZO75970 2070 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 FAM170AA1A519 330 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 NKX6-3A6NJ46 265 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 A8MVM7 634 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 D6RAR5 112 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 GFPT2O94808 682 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 GSRP00390 522 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 STATHP02808 62 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 APODP05090 189 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 CYP11B2P19099 503 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 TPSB2P20231 275 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 OR1D2P34982 312 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 TPMTP51580 245 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 NUCB1Q02818 461 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 RBPJQ06330 500 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 CYLC2Q14093 348 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 GCKRQ14397 625 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 TPSAB1Q15661 275 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 VWC2Q2TAL6 325 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms