RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 TMEM44Q2T9K0 475 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 SPDYAQ5MJ70 313 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 SH2D5Q6ZV89 423 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 OR2L13Q8N349 312 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 GMPPAQ96IJ6 420 aaPredicted RBP17.15■□□□□ 0.34
MUC1-211ENST00000438413 LMF2Q9BU23 707 aaKnown RBP17.15■□□□□ 0.34
MUC1-211ENST00000438413 TSPYL1Q9H0U9 437 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 GLIPR2Q9H4G4 154 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 CXorf56Q9H5V9 222 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 ZNF701Q9NV72 531 aaPredicted RBP17.15■□□□□ 0.34
MUC1-211ENST00000438413 STOML1Q9UBI4 398 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 ADAM21Q9UKJ8 722 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 VDAC3Q9Y277 283 aa17.15■□□□□ 0.34
MUC1-211ENST00000438413 CSPG4Q6UVK1 2322 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 IGLV3-32A0A0A0MS00 114 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 UTS2O95399 124 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 PLAUP00749 431 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 ATP5F1P24539 256 aaPredicted RBP17.14■□□□□ 0.33
MUC1-211ENST00000438413 NTSP30990 170 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 SLC6A8P48029 635 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 NR1H2P55055 460 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 PKNOX1P55347 436 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 PRR5P85299 388 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 STAC2Q6ZMT1 411 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 CXXC5Q7LFL8 322 aaKnown RBP17.14■□□□□ 0.33
MUC1-211ENST00000438413 ANP32BQ92688 251 aaKnown RBP17.14■□□□□ 0.33
MUC1-211ENST00000438413 PLPPR2Q96GM1 343 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 FMO2Q99518 471 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 C3orf14Q9HBI5 128 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 TAS2R7Q9NYW3 318 aa17.14■□□□□ 0.33
MUC1-211ENST00000438413 ROS1P08922 2347 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 A0A087WUV0 522 aaPredicted RBP17.13■□□□□ 0.33
MUC1-211ENST00000438413 SERTM1A2A2V5 107 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 TMCC2O75069 709 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 SS18L1O75177 396 aaPredicted RBP17.13■□□□□ 0.33
MUC1-211ENST00000438413 KCNH1O95259 989 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 ZNF17P17021 662 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 GABRA3P34903 492 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 ATP5J2P56134 94 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.13■□□□□ 0.33
MUC1-211ENST00000438413 GRAMD1BQ3KR37 738 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 FAM71E1Q6IPT2 247 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 APOOLQ6UXV4 268 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 WFDC8Q8IUA0 241 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 SLC22A9Q8IVM8 553 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 C17orf53Q8N3J3 647 aaPredicted RBP17.13■□□□□ 0.33
MUC1-211ENST00000438413 ZNF611Q8N823 705 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 OR10D3Q8NH80 312 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 SLC9A6Q92581 669 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 ELP4Q96EB1 424 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 L3HYPDHQ96EM0 354 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 AMDHD1Q96NU7 426 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 MYNNQ9NPC7 610 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 FANCFQ9NPI8 374 aa17.13■□□□□ 0.33
MUC1-211ENST00000438413 MCTS1Q9ULC4 181 aaKnown RBP17.13■□□□□ 0.33
MUC1-211ENST00000438413 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 GXYLT2A0PJZ3 443 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 HS3ST1O14792 307 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 NID1P14543 1247 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 IL11P20809 199 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 PRKAA2P54646 552 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 IMPG1Q17R60 797 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 BEND4Q6ZU67 534 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 LCA5Q86VQ0 697 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 WDR75Q8IWA0 830 aaKnown RBP17.12■□□□□ 0.33
MUC1-211ENST00000438413 SPATA3Q8NHX4 192 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.12■□□□□ 0.33
MUC1-211ENST00000438413 PIK3R3Q92569 461 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 ACTR6Q9GZN1 396 aa17.12■□□□□ 0.33
MUC1-211ENST00000438413 PAQR5Q9NXK6 330 aaPredicted RBP17.12■□□□□ 0.33
MUC1-211ENST00000438413 POLR3HQ9Y535 204 aaPredicted RBP17.12■□□□□ 0.33
MUC1-211ENST00000438413 CHD3Q12873 2000 aaKnown RBP17.12■□□□□ 0.33
MUC1-211ENST00000438413 USF3Q68DE3 2245 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 SYNGR4O95473 234 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 IGKV1D-16P01601 117 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 FOXA1P55317 472 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 TNK1Q13470 666 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 CAPRIN1Q14444 709 aaKnown RBP17.11■□□□□ 0.33
MUC1-211ENST00000438413 CTU2Q2VPK5 515 aaKnown RBP17.11■□□□□ 0.33
MUC1-211ENST00000438413 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 STK32CQ86UX6 486 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 ADGRG7Q96K78 797 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 TMEM204Q9BSN7 226 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 GSTO2Q9H4Y5 243 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 MID1IP1Q9NPA3 183 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 EQTNQ9NQ60 294 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 GLRX2Q9NS18 164 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 RTTNQ86VV8 2226 aa17.11■□□□□ 0.33
MUC1-211ENST00000438413 A0A087WZY1 265 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 TTC36A6NLP5 189 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 CXCL13O43927 109 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 CRLF1O75462 422 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 OPN1LWP04000 364 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 IFI6P09912 130 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 KRTAP1-1Q07627 177 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 GALNT10Q86SR1 603 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 EXOC3L1Q86VI1 746 aa17.1■□□□□ 0.33
MUC1-211ENST00000438413 GTPBP8Q8N3Z3 284 aaPredicted RBP17.1■□□□□ 0.33
MUC1-211ENST00000438413 MMGT1Q8N4V1 131 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms