RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 FAM110BQ8TC76 370 aa14.22□□□□□ -0.13
NUP50-210ENST00000434760 INTS12Q96CB8 462 aaKnown RBP14.22□□□□□ -0.13
NUP50-210ENST00000434760 FAM120BQ96EK7 910 aaKnown RBP14.22□□□□□ -0.13
NUP50-210ENST00000434760 CLEC4MQ9H2X3 399 aaPredicted RBP14.22□□□□□ -0.13
NUP50-210ENST00000434760 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.22□□□□□ -0.13
NUP50-210ENST00000434760 ZDHHC2Q9UIJ5 367 aa14.22□□□□□ -0.13
NUP50-210ENST00000434760 V9GYY5 206 aaPredicted RBP14.22□□□□□ -0.13
NUP50-210ENST00000434760 HEATR5AQ86XA9 2040 aa14.22□□□□□ -0.13
NUP50-210ENST00000434760 ALG1L2C9J202 215 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 SKAP2O75563 359 aaPredicted RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 KCNH1O95259 989 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 OXSR1O95747 527 aaPredicted RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 ANGPTL1O95841 491 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 BPGMP07738 259 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 HK1P19367 917 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 HPCAL1P37235 193 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 SUCLG1P53597 346 aaKnown RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 PSMD4P55036 377 aaKnown RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 ZNF844Q08AG5 666 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 VPS26BQ4G0F5 336 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 EXOC3L1Q86VI1 746 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 OR7A2PQ8NGA2 310 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 OR5M1Q8NGP8 315 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 PSMA8Q8TAA3 256 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 GPR151Q8TDV0 419 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 LRRC46Q96FV0 321 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 OTUB1Q96FW1 271 aaPredicted RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 PPP3R2Q96LZ3 170 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 KLHDC3Q9BQ90 382 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 C1orf50Q9BV19 199 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 POLDIP3Q9BY77 421 aaKnown RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 TBL1XR1Q9BZK7 514 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 ACBD3Q9H3P7 528 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 LIME1Q9H400 295 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 C3orf14Q9HBI5 128 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 EML4Q9HC35 981 aaKnown RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 SH3BP4Q9P0V3 963 aa14.21□□□□□ -0.13
NUP50-210ENST00000434760 MRTO4Q9UKD2 239 aaKnown RBP14.21□□□□□ -0.13
NUP50-210ENST00000434760 RAI1Q7Z5J4 1906 aaPredicted RBP14.21□□□□□ -0.14
NUP50-210ENST00000434760 ACANP16112 2415 aa14.21□□□□□ -0.14
NUP50-210ENST00000434760 EMC8O43402 210 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 KCNK2O95069 426 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 LAMP1P11279 417 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 PEPDP12955 493 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 CCKARP32238 428 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 MANFP55145 182 aaKnown RBP14.2□□□□□ -0.14
NUP50-210ENST00000434760 CLDN20P56880 219 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 DAZAP2Q15038 168 aaPredicted RBP14.2□□□□□ -0.14
NUP50-210ENST00000434760 GUSBP1Q15486 140 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 C6orf136Q5SQH8 315 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 LRIG3Q6UXM1 1119 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 SZRD1Q7Z422 152 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 GGNQ86UU5 652 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 KIF18BQ86Y91 864 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 HOMEZQ8IX15 550 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 RIMKLAQ8IXN7 391 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 UBQLNLQ8IYU4 475 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 OR4C3Q8NH37 302 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 DUSP19Q8WTR2 217 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 NUDT8Q8WV74 236 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 FIG4Q92562 907 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 SLC9A6Q92581 669 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 C16orf58Q96GQ5 468 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 PKNOX2Q96KN3 472 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 NPAS1Q99742 590 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 RBM24Q9BX46 236 aaKnown RBP14.2□□□□□ -0.14
NUP50-210ENST00000434760 CXXC4Q9H2H0 198 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 SDHAF3Q9NRP4 125 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 FBXO34Q9NWN3 711 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 PACSIN3Q9UKS6 424 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 ZNF337Q9Y3M9 751 aa14.2□□□□□ -0.14
NUP50-210ENST00000434760 TUBAL3A6NHL2 446 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 SLC22A20A6NK97 555 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 TMEM114B3SHH9 223 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 SHISA8B8ZZ34 492 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 H3BML4 177 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 PEX11AO75192 247 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 SLU7O95391 586 aaKnown RBP14.19□□□□□ -0.14
NUP50-210ENST00000434760 ZNF17P17021 662 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 MAPK1P28482 360 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 SERPINB4P48594 390 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 IST1P53990 364 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 PRKAG1P54619 331 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 C17orf67Q0P5P2 114 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 GLYR1Q49A26 553 aaPredicted RBP14.19□□□□□ -0.14
NUP50-210ENST00000434760 ATP6AP1LQ52LC2 224 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 VWA1Q6PCB0 445 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 ZCCHC12Q6PEW1 402 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 FIGNL1Q6PIW4 674 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 R3HCC1LQ7Z5L2 792 aaKnown RBP14.19□□□□□ -0.14
NUP50-210ENST00000434760 LUZP2Q86TE4 346 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 CDC20BQ86Y33 519 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 KRTCAP2Q8N6L1 136 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 METTL25Q8N6Q8 603 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 LINC01560Q8TB33 94 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 NINJ1Q92982 152 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 PIGMQ9H3S5 423 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 CXorf36Q9H7Y0 433 aa14.19□□□□□ -0.14
NUP50-210ENST00000434760 PTGES2Q9H7Z7 377 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms