RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CCKARP32238 428 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 CLK3P49761 638 aaKnown RBP19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 EEF1A1P68104 462 aaKnown RBP19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 PON3Q15166 354 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 EEF1A1P5Q5VTE0 462 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 Q6ZSR9 355 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 FNDC9Q8TBE3 224 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 PPCDCQ96CD2 204 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 METTL2AQ96IZ6 378 aaKnown RBP19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 FCRL1Q96LA6 429 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 FAM111AQ96PZ2 611 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 PIGQQ9BRB3 760 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 GATA5Q9BWX5 397 aaPredicted RBP19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 C3orf14Q9HBI5 128 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 DLL4Q9NR61 685 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 C6orf203Q9P0P8 240 aaPredicted RBP19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 ZFHX3Q15911 3703 aa19.65■□□□□ 0.74
RPUSD3-206ENST00000433535 TMEM233B4DJY2 109 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 NPIPB8E9PQR5 432 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 CASKO14936 926 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 IFI6P09912 130 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 LINC00032P0C843 101 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 PRPS2P11908 318 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 EFNA1P20827 205 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 KIR2DL2P43627 348 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 PRKAG1P54619 331 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 EEFSECP57772 596 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 PRR5P85299 388 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 KANK2Q63ZY3 851 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 ZNF474Q6S9Z5 364 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 MREGQ8N565 214 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 WFDC11Q8NEX6 87 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 OR2W6PQ8NHA6 318 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 ZFP28Q8NHY6 868 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 SLC9A6Q92581 669 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 PGM2Q96G03 612 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 ZNF764Q96H86 408 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 POM121Q96HA1 1249 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 REEP4Q9H6H4 257 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 KLHL28Q9NXS3 571 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 SH3BP4Q9P0V3 963 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 NDRG3Q9UGV2 375 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 BAIAP2L1Q9UHR4 511 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 VDAC3Q9Y277 283 aa19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 FLNAP21333 2647 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-206ENST00000433535 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 IGLV3-32A0A0A0MS00 114 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 SIAH2O43255 324 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 TNFRSF21O75509 655 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 NKX2-2O95096 273 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 CHRNGP07510 517 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 ACP2P11117 423 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 NEFHP12036 1026 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 MAP3K8P41279 467 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 SLC18A2Q05940 514 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 C17orf67Q0P5P2 114 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 GALNTL6Q49A17 601 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 RFTN2Q52LD8 501 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 GATSQ8NAP1 163 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 HOXB13Q92826 284 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 GIMAP5Q96F15 307 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 OTUB1Q96FW1 271 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 WFIKKN1Q96NZ8 548 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 MS4A4EQ96PG1 132 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 GSX1Q9H4S2 264 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 RNF122Q9H9V4 155 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 MID2Q9UJV3 735 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 EIF3LQ9Y262 564 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 ZNF175Q9Y473 711 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 DNAJC15Q9Y5T4 150 aa19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 ZNF469Q96JG9 3925 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-206ENST00000433535 TTC36A6NLP5 189 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 LINC01387J3KSC0 135 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 LSM1O15116 133 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 TUBBP07437 444 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 CD53P19397 219 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 CD79BP40259 229 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 MANFP55145 182 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 PDE7AQ13946 482 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 TMEM44Q2T9K0 475 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 PPP4R4Q6NUP7 873 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 FIGNL1Q6PIW4 674 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 ZAR1Q86SH2 424 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 GGNQ86UU5 652 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 METTL25Q8N6Q8 603 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 CDRT4Q8N9R6 151 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 NUP43Q8NFH3 380 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 OR4C3Q8NH37 302 aa19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 ZBED6CLQ96FA7 236 aaPredicted RBP19.62■□□□□ 0.73
RPUSD3-206ENST00000433535 DEFB108AA8MXU0 73 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 CTIFO43310 598 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 EMC8O43402 210 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 TBX19O60806 448 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 TRIM13O60858 407 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 AQP8O94778 261 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 OXSR1O95747 527 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 CHEK2O96017 543 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 CGAP01215 116 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 POU2F1P14859 743 aa19.61■□□□□ 0.73
RPUSD3-206ENST00000433535 FRKP42685 505 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms