RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SUV39H2Q9H5I1 410 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 MYNNQ9NPC7 610 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ASB6Q9NWX5 421 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 BABAM2Q9NXR7 383 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 FXYD6-FXYD2A0A087WZ82 144 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 LRRN3E7EW58 273 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 J3QLW9 94 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PEX14O75381 377 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 KLHL18O94889 574 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 NMBP08949 121 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 C1GALT1C1LP0DN25 315 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF19P17023 458 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 GSTM3P21266 225 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 NFYAP23511 347 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ATP5A1P25705 553 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR1D2P34982 312 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 EFNB1P98172 346 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC25A30Q5SVS4 291 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR5M10Q6IEU7 315 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 FGD2Q7Z6J4 655 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SERPINA12Q8IW75 414 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 TBC1D19Q8N5T2 526 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF454Q8N9F8 522 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 BOLLQ8N9W6 283 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 MORN4Q8NDC4 146 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR4Q3Q8NH05 313 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR5W2Q8NH69 310 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 MYLIPQ8WY64 445 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 NEURL3Q96EH8 262 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 UBL7Q96S82 380 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 FXYD6Q9H0Q3 95 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR51V1Q9H2C8 321 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 LRRN3Q9H3W5 708 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 A4GALTQ9NPC4 353 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 CA10Q9NS85 328 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 HPF1Q9NWY4 346 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 KLHL42Q9P2K6 505 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 NTNG1Q9Y2I2 539 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 TDRD15B5MCY1 1934 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PRAMEF27A3QJZ7 478 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 GLTPD2A6NH11 291 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 GLOD5A6NK44 160 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 F8A1P23610 371 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 E2F1Q01094 437 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 HTR4Q13639 388 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 MELKQ14680 651 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 RGS7BPQ6MZT1 257 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 IKBIPQ70UQ0 350 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 SMPDL3AQ92484 453 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 PTP4A1Q93096 173 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 RADILQ96JH8 1075 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 F2RL3Q96RI0 385 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 ZCCHC3Q9NUD5 404 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 COPZ2Q9P299 210 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 NFKBIL1Q9UBC1 381 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 CBLCQ9ULV8 474 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 OR51B4Q9Y5P0 310 aa10.82□□□□□ -0.68
HMGCS1-202ENST00000433297 G3V3Q6 166 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 THBS2P35442 1172 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 GDNFP39905 211 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 RAD52P43351 418 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 FNTBP49356 437 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 TFAP2EQ6VUC0 442 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 NHLRC1Q6VVB1 395 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 CFAP206Q8IYR0 622 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ACBD7Q8N6N7 88 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 POGLUT1Q8NBL1 392 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 CNOT9Q92600 299 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 IL17FQ96PD4 163 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 LDAHQ9H6V9 325 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 CWH43Q9H720 699 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 MRPS18AQ9NVS2 196 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 P2RX2Q9UBL9 471 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 GPR160Q9UJ42 338 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 PLAGL1Q9UM63 463 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 SOCS5O75159 536 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 HOXC8P31273 242 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 CD70P32970 193 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF169Q14929 603 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ETFDHQ16134 617 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 DGLUCYQ7Z3D6 616 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 TMEM99Q8N816 258 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 GNPDA2Q8TDQ7 276 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC5A11Q8WWX8 675 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 RIOK2Q9BVS4 552 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 FAIM2Q9BWQ8 316 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC6A15Q9H2J7 730 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 HINT3Q9NQE9 182 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 KDM4EB2RXH2 506 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF821O75541 412 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 SPDEFO95238 335 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 STATHP02808 62 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ENTPD8Q5MY95 495 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 TMEM220Q6QAJ8 160 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 CXXC5Q7LFL8 322 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ARL14EPQ8N8R7 260 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 RELL2Q8NC24 303 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms