RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 KLC3Q6P597 504 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 TRMT10BQ6PF06 316 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 GTF2IRD2Q86UP8 949 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 AGGF1Q8N302 714 aaeCLIP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 ZNF615Q8N8J6 731 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 OR52R1Q8NGF1 315 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 ANKRD49Q8WVL7 239 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 HGDQ93099 445 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 CTHRC1Q96CG8 243 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 GMPPAQ96IJ6 420 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 G6PC3Q9BUM1 346 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 PARD6BQ9BYG5 372 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 C12orf65Q9H3J6 166 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 ALG9Q9H6U8 611 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 CHODLQ9H9P2 273 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 NMRAL1Q9HBL8 299 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 HHATLQ9HCP6 504 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 MED4Q9NPJ6 270 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 ZNF446Q9NWS9 450 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 HEY2Q9UBP5 337 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 FBXL2Q9UKC9 423 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 MRTO4Q9UKD2 239 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 NFU1Q9UMS0 254 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 GPR52Q9Y2T5 361 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 MAGED1Q9Y5V3 778 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.04□□□□□ -1.285e-8■■■■■ 27.8
ECHDC1-207ENST00000430841 C1orf226A1L170 272 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 FAM234BA2RU67 622 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 TMPRSS11DO60235 418 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 KIAA0513O60268 411 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 SOX30O94993 753 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 SEMA3DO95025 777 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 PLAUP00749 431 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CLPSP04118 112 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CT62P0C5K7 136 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 SLC25A16P16260 332 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 DRD5P21918 477 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 FEN1P39748 380 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 PPICP45877 212 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 RFX3P48380 749 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 PSMD4P55036 377 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CDH11P55287 796 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 SQLEQ14534 574 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 MORF4L2Q15014 288 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 OR4D1Q15615 310 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 ZNHIT3Q15649 155 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 TMEM249Q2WGJ8 235 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 LGSNQ5TDP6 509 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 AGAP6Q5VW22 663 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CYB5R2Q6BCY4 276 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 FAM166AQ6J272 317 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 LRFN4Q6PJG9 635 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 C12orf54Q6X4T0 127 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CCDC25Q86WR0 208 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CTAGE3PQ8IX95 158 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 SAMD14Q8IZD0 417 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 ZNF619Q8N2I2 560 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 RNF175Q8N4F7 328 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 WDSUB1Q8N9V3 476 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 KISS1RQ969F8 398 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 LRRC1Q9BTT6 524 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 HDHD5Q9BXW7 423 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 FUT8Q9BYC5 575 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 TBL1XR1Q9BZK7 514 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 OR10A4Q9H209 315 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 DSN1Q9H410 356 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 DDX31Q9H8H2 851 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CAB39LQ9H9S4 337 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 GLRX2Q9NS18 164 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 NMRK1Q9NWW6 199 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 XPR1Q9UBH6 696 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CLEC4AQ9UMR7 237 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 PLLPQ9Y342 182 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 MRPS18CQ9Y3D5 142 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 ASB4Q9Y574 426 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 PSAT1Q9Y617 370 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 AP4B1Q9Y6B7 739 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 CR1P17927 2039 aa7.03□□□□□ -1.28
ECHDC1-207ENST00000430841 UBXN8O00124 270 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 PGRMC2O15173 223 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 GMFGO60234 142 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 UGDHO60701 494 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 KERAO60938 352 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 COQ9O75208 318 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 DEAF1O75398 565 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 IGHV4-39P01824 125 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 ATP1B1P05026 303 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 KLK1P06870 262 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 CSF3P09919 207 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 CD1DP15813 335 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 EVI2BP34910 448 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 BSGP35613 385 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 GZMKP49863 264 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 ZNF41P51814 821 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 CCNG1P51959 295 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 RAB10P61026 200 aa7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 PDIA2Q13087 525 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-207ENST00000430841 FRG1Q14331 258 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms