RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 NPIPB9F8W1W9 429 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 GNB5O14775 395 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 SCO2O43819 266 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 STX11O75558 287 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 UNC5CO95185 931 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 IGHG3P01860 377 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 ATP12AP54707 1039 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 FUT5Q11128 374 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 ELOAQ14241 798 aaKnown RBP18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 SLC10A1Q14973 349 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 FLYWCH1Q4VC44 716 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 APOOLQ6UXV4 268 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 ROPN1LQ96C74 230 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 DTNBP1Q96EV8 351 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 GNRHR2Q96P88 292 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 RTN4RQ9BZR6 473 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 ACKR4Q9NPB9 350 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 THUMPD1Q9NXG2 353 aaKnown RBP18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 SVILO95425 2214 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 IGLV3-32A0A0A0MS00 114 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 PRAMEF27A3QJZ7 478 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 BBIP1A8MTZ0 92 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 SCDO00767 359 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 CBR3O75828 277 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 WISP1O95388 367 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 ANGPTL1O95841 491 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 HPGDP15428 266 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 GNLYP22749 145 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 GDF1P27539 372 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 DCTP40126 519 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 CRATP43155 626 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 FADDQ13158 208 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 MRPL49Q13405 166 aaKnown RBP18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 RGNQ15493 299 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 DHDDSQ86SQ9 333 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 MARCH3Q86UD3 253 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 MTDHQ86UE4 582 aaKnown RBP18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 MISPQ8IVT2 679 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 ZNF527Q8NB42 609 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 OIT3Q8WWZ8 545 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 TRNT1Q96Q11 434 aaKnown RBP18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 SAP130Q9H0E3 1048 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 DEFB127Q9H1M4 99 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 ARMCX1Q9P291 453 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 HRH3Q9Y5N1 445 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 POLEQ07864 2286 aa18.31■□□□□ 0.52
CSNK1E-207ENST00000430335 A0A1B0GVC2 190 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 FBP2O00757 339 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 KIAA0513O60268 411 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 FCMRO60667 390 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 HCN1O60741 890 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 SHOX2O60902 331 aaPredicted RBP18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 ZIC2O95409 532 aaPredicted RBP18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 HPNP05981 417 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 BMP2P12643 396 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 ETFAP13804 333 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 DSTNP60981 165 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 RBPJQ06330 500 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 C17orf67Q0P5P2 114 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 KLHL26Q53HC5 615 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 LRRC74BQ6ZQY2 392 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 CHERPQ8IWX8 916 aaKnown RBP18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 FADS6Q8N9I5 356 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 CCDC106Q9BWC9 280 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 MYLK2Q9H1R3 596 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 PPP4R1LQ9P1A2 415 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 P2RX2Q9UBL9 471 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 ADAM21Q9UKJ8 722 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 CORO2BQ9UQ03 480 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 WDR45Q9Y484 360 aa18.3■□□□□ 0.52
CSNK1E-207ENST00000430335 PYCARD-AS1I3L0S3 204 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 NDUFB5O43674 189 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 SUSD5O60279 629 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 CDC40O60508 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 CELA3AP09093 270 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 UQCRFS1P47985 274 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 HPCAP84074 193 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 STX5Q13190 355 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 NFYCQ13952 458 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 CYLC2Q14093 348 aaPredicted RBP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 ZNF141Q15928 474 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 GPAT3Q53EU6 434 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 RUNDC3AQ59EK9 446 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 TYW3Q6IPR3 259 aaKnown RBP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 ARHGAP11AQ6P4F7 1023 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 FRRS1Q6ZNA5 592 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 TRILQ7L0X0 811 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 MTERF4Q7Z6M4 381 aaKnown RBP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 SNX32Q86XE0 403 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 RP9Q8TA86 221 aaKnown RBP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 DUSP19Q8WTR2 217 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 PMM1Q92871 262 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 CCT8L2Q96SF2 557 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 CGREF1Q99674 301 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 CPPED1Q9BRF8 314 aaPredicted RBP18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 FBXL2Q9UKC9 423 aa18.29■□□□□ 0.52
CSNK1E-207ENST00000430335 MKLN1Q9UL63 735 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms