RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ST3GAL3Q11203 375 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 MLC1Q15049 377 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 P2RY14Q15391 338 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 MZT2AQ6P582 158 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 C1orf122Q6ZSJ8 110 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 NLRP8Q86W28 1048 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 NKAIN4Q8IVV8 208 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 BBS1Q8NFJ9 593 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 RIPOR3Q96MK2 946 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 CTRCQ99895 268 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 CCDC32Q9BV29 185 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 ING3Q9NXR8 418 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 A0A087WUU8 490 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 BTN3A3O00478 584 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 EEF1E1O43324 174 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 AKAP8O43823 692 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 CDC123O75794 336 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 NFATC1O95644 943 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 CHRM4P08173 479 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 HOXB9P17482 250 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 AK4P27144 223 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 PSPHP78330 225 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ZNF33BQ06732 778 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 HYAL2Q12891 473 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 E2F2Q14209 437 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 IRF3Q14653 427 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 TRAM2Q15035 370 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 TATDN3Q17R31 274 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 HNRNPA1L2Q32P51 320 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 SLX4IPQ5VYV7 408 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ZNF761Q86XN6 746 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 FAM98AQ8NCA5 519 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 SETD7Q8WTS6 366 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 RFKQ969G6 155 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 OMA1Q96E52 524 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 GIMAP5Q96F15 307 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 OR2A14Q96R47 310 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 INSM2Q96T92 566 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 SGPP1Q9BX95 441 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 CDCA4Q9BXL8 241 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 CHIAQ9BZP6 476 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 RNF121Q9H920 327 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 MBNL1Q9NR56 388 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 USP36Q9P275 1121 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 CD207Q9UJ71 328 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ADAM30Q9UKF2 790 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 NDRG2Q9UN36 371 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 NOX1Q9Y5S8 564 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 FRYLO94915 3013 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 MAGEB4O15481 346 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 SSNA1O43805 119 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 SEMG1P04279 462 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 HLA-DPB1P04440 258 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 S100A6P06703 90 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 GRPRP30550 384 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 GDI1P31150 447 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 NAA10P41227 235 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 HTR2BP41595 481 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ACTR1BP42025 376 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 DCDC1P59894 354 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ACTR1AP61163 376 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 CDK3Q00526 305 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 RHAGQ02094 409 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ODF4Q2M2E3 257 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 FAM27D1Q5T7N8 215 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 KIAA1324Q6UXG2 1013 aaKnown RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 LURAP1LQ8IV03 231 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 LAS2Q8IYD9 372 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 GJD3Q8N144 294 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 BEST4Q8NFU0 473 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 AMDHD1Q96NU7 426 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 GPA33Q99795 319 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 COQ7Q99807 217 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 KXD1Q9BQD3 176 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 CCDC3Q9BQI4 270 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 BTBD2Q9BX70 525 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 MCUBQ9NWR8 336 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 STMN3Q9NZ72 180 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 AKAP7Q9P0M2 348 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 TBC1D24Q9ULP9 559 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 SLC7A7Q9UM01 511 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 INMT-MINDY4F8WBC2 141 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 SMPD2O60906 423 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 LDB3O75112 727 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 UBL4AP11441 157 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 PYCR1P32322 319 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 TRIM23P36406 574 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 P2RY2P41231 377 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 FABP5Q01469 135 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 MLLT11Q13015 90 aaPredicted RBP7.55□□□□□ -1.2
HPS4-205ENST00000429411 MINDY4Q4G0A6 757 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ZNF542PQ5EBM4 170 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 MEDAGQ5VYS4 303 aa7.55□□□□□ -1.2
HPS4-205ENST00000429411 ENPP7Q6UWV6 458 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms