RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 MGAT4BQ9UQ53 548 aa12.66□□□□□ -0.38
PDE6D-203ENST00000428104 GOLGA6L10A6NI86 522 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 CSNK2A2P19784 350 aaPredicted RBP12.65□□□□□ -0.38
PDE6D-203ENST00000428104 APEX1P27695 318 aaKnown RBP12.65□□□□□ -0.38
PDE6D-203ENST00000428104 HILS1P60008 231 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 CUL3Q13618 768 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 ACAP2Q15057 778 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 HBMQ6B0K9 141 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 GTF2IRD2BQ6EKJ0 949 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 SLC48A1Q6P1K1 146 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 Q6ZT83 130 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 MARCH3Q86UD3 253 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 GTF2IRD2Q86UP8 949 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 ZC3HC1Q86WB0 502 aaKnown RBP12.65□□□□□ -0.38
PDE6D-203ENST00000428104 SLC44A2Q8IWA5 706 aaPredicted RBP12.65□□□□□ -0.38
PDE6D-203ENST00000428104 OSTF1Q92882 214 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 CFAP36Q96G28 342 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 DESI2Q9BSY9 194 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 TRMOQ9BU70 441 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
PDE6D-203ENST00000428104 NPIPA5A0A0B4J1W7 369 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 NPIPA7E9PJI5 369 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 KLK1P06870 262 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 CTAGE8P0CG41 777 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 NPIPA8P0DM63 369 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 EDNRAP25101 427 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 PTAFRP25105 342 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 CD40P25942 277 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 MRPS22P82650 360 aaKnown RBP12.64□□□□□ -0.39
PDE6D-203ENST00000428104 ZNF239Q16600 458 aaKnown RBP12.64□□□□□ -0.39
PDE6D-203ENST00000428104 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 DEF8Q6ZN54 512 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 ANKS4BQ8N8V4 417 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 MAIP1Q8WWC4 291 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 INPP5KQ9BT40 448 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 PRSS50Q9UI38 385 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 PCDHB10Q9UN67 800 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 OR10H1Q9Y4A9 318 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 PCDHGA11Q9Y5H2 935 aa12.64□□□□□ -0.39
PDE6D-203ENST00000428104 K7EPI3 171 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 NDUFB5O43674 189 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
PDE6D-203ENST00000428104 CLDN9O95484 217 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 S100BP04271 92 aaPredicted RBP12.63□□□□□ -0.39
PDE6D-203ENST00000428104 ZNF17P17021 662 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 GGT1P19440 569 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 CDH15P55291 814 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 PHEXP78562 749 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 HP1BP3Q5SSJ5 553 aaPredicted RBP12.63□□□□□ -0.39
PDE6D-203ENST00000428104 THSD4Q6ZMP0 1018 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 ESPNLQ6ZVH7 1005 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 RNF10Q8N5U6 811 aaKnown RBP12.63□□□□□ -0.39
PDE6D-203ENST00000428104 ZNF540Q8NDQ6 660 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 MTBPQ96DY7 904 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 FBXO17Q96EF6 278 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 SNX18Q96RF0 628 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 ABCG2Q9UNQ0 655 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 TSC22D4Q9Y3Q8 395 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 PCDHA9Q9Y5H5 950 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 ATP23Q9Y6H3 246 aa12.63□□□□□ -0.39
PDE6D-203ENST00000428104 OR5H1A6NKK0 313 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 LILRA1O75019 489 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 PABPC4LP0CB38 370 aaKnown RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CD1DP15813 335 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 PIK3CGP48736 1102 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CHN2P52757 468 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 ARFIP2P53365 341 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 DVL1P1P54792 670 aaPredicted RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CARD18P57730 90 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 RAC1P63000 192 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CHRNEQ04844 493 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 RNPS1Q15287 305 aaKnown RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 MST1LQ2TV78 715 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 ZNF628Q5EBL2 1059 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 SH2D4BQ5SQS7 431 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 TBC1D1Q86TI0 1168 aaPredicted RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 PPIL6Q8IXY8 311 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 GTPBP8Q8N3Z3 284 aaPredicted RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 SVOPLQ8N434 492 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 TEX9Q8N6V9 391 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CNRIP1Q96F85 164 aaPredicted RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 NAT9Q9BTE0 207 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 SRXN1Q9BYN0 137 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 CAB39LQ9H9S4 337 aa12.62□□□□□ -0.39
PDE6D-203ENST00000428104 FAM120CQ9NX05 1096 aaKnown RBP12.62□□□□□ -0.39
PDE6D-203ENST00000428104 A0A1W2PR80 420 aa12.61□□□□□ -0.39
PDE6D-203ENST00000428104 C1orf226A1L170 272 aa12.61□□□□□ -0.39
PDE6D-203ENST00000428104 H0YIV9 168 aa12.61□□□□□ -0.39
PDE6D-203ENST00000428104 M0R1B8 84 aa12.61□□□□□ -0.39
PDE6D-203ENST00000428104 PHGDHO43175 533 aaKnown RBP12.61□□□□□ -0.39
PDE6D-203ENST00000428104 SEMA3DO95025 777 aa12.61□□□□□ -0.39
PDE6D-203ENST00000428104 PGM3O95394 542 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms