RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 VDAC3Q9Y277 283 aa12.59□□□□□ -0.39
HDAC6-206ENST00000426196 TNFSF11O14788 317 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ADAMDEC1O15204 470 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 GMFGO60234 142 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 NME6O75414 186 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-206ENST00000426196 PIAS1O75925 651 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 CLDN9O95484 217 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ADAP00813 363 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 GFAPP14136 432 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ME2P23368 584 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ZNF155Q12901 538 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-206ENST00000426196 PPA1Q15181 289 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 TMEM44Q2T9K0 475 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 FRG2Q64ET8 278 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ZNF662Q6ZS27 426 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 RAPH1Q70E73 1250 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 BHLHA15Q7RTS1 189 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-206ENST00000426196 SSX8Q7RTT4 187 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 COMMD6Q7Z4G1 85 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 TBC1D1Q86TI0 1168 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-206ENST00000426196 MUC15Q8N387 334 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 METTL4Q8N3J2 472 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-206ENST00000426196 CEP112Q8N8E3 955 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 OR4N2Q8NGD1 307 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 CDKL2Q92772 493 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 KAT2AQ92830 837 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 MSI2Q96DH6 328 aaKnown RBP12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 FRG2BQ96QU4 278 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 HBEGFQ99075 208 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 RBBP8Q99708 897 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 CPNE1Q99829 537 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 IPPKQ9H8X2 491 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 TAS2R9Q9NYW1 312 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 UTS2RQ9UKP6 389 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 ACOT9Q9Y305 439 aa12.58□□□□□ -0.4
HDAC6-206ENST00000426196 H7C417 338 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 NDUFB5O43674 189 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 LTA4HP09960 611 aaKnown RBP12.57□□□□□ -0.4
HDAC6-206ENST00000426196 BMP4P12644 408 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 APEHP13798 732 aaKnown RBP12.57□□□□□ -0.4
HDAC6-206ENST00000426196 EFNA4P52798 201 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 C17orf67Q0P5P2 114 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 PDIA2Q13087 525 aaKnown RBP12.57□□□□□ -0.4
HDAC6-206ENST00000426196 IFT88Q13099 833 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 FASTKD3Q14CZ7 662 aaKnown RBP12.57□□□□□ -0.4
HDAC6-206ENST00000426196 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
HDAC6-206ENST00000426196 PFKFB4Q16877 469 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 CR1LQ2VPA4 569 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 HBMQ6B0K9 141 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 TTC19Q6DKK2 380 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-206ENST00000426196 GOLGA7Q7Z5G4 137 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 MARCH3Q86UD3 253 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 TDRPQ86YL5 185 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 DEPDC4Q8N2C3 294 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 OR9A2Q8NGT5 310 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 ABHD3Q8WU67 409 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 ATP6V1E2Q96A05 226 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 DHRS9Q9BPW9 319 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 TBL1XR1Q9BZK7 514 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 RTN4RQ9BZR6 473 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 FLRT3Q9NZU0 649 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 SENP1Q9P0U3 644 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 KLHL13Q9P2N7 655 aa12.57□□□□□ -0.4
HDAC6-206ENST00000426196 A0A087WZY1 265 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 NTN1O95631 604 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 ESRRBO95718 433 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 OPN1LWP04000 364 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 MTHFD2P13995 350 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 EGR1P18146 543 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 IVDP26440 423 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 SRP14P37108 136 aaKnown RBP12.56□□□□□ -0.4
HDAC6-206ENST00000426196 GP5P40197 560 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 ALDH18A1P54886 795 aaKnown RBP12.56□□□□□ -0.4
HDAC6-206ENST00000426196 RAC1P63000 192 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 DLG1Q12959 904 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 DECR1Q16698 335 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 FAM174BQ3ZCQ3 159 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 CYP27C1Q4G0S4 372 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 SLC22A25Q6T423 547 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 NUFIP2Q7Z417 695 aaKnown RBP12.56□□□□□ -0.4
HDAC6-206ENST00000426196 SAMD14Q8IZD0 417 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-206ENST00000426196 GTPBP8Q8N3Z3 284 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-206ENST00000426196 SPC24Q8NBT2 197 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 OR2W6PQ8NHA6 318 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 RNF128Q8TEB7 428 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 TM4SF18Q96CE8 201 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 NXNL1Q96CM4 212 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 MTBPQ96DY7 904 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 PIMREGQ9BSJ6 248 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 TMEM185BQ9H7F4 350 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 GIMAP4Q9NUV9 329 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 MRTO4Q9UKD2 239 aaKnown RBP12.56□□□□□ -0.4
HDAC6-206ENST00000426196 SLC12A4Q9UP95 1085 aa12.56□□□□□ -0.4
HDAC6-206ENST00000426196 MGAT4BQ9UQ53 548 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms