RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 POC1B-GALNT4F8VUJ3 575 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CLOCKO15516 846 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SIAH2O43255 324 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SS18L1O75177 396 aaPredicted RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HSPA4LO95757 839 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 JUNP05412 331 aaKnown RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SNRPAP09012 282 aaKnown RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PRPS2P11908 318 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TSPAN8P19075 237 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DDCP20711 480 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TIA1P31483 386 aaKnown RBP eCLIP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GABRA3P34903 492 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 EIF1P41567 113 aaKnown RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CLDN20P56880 219 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PRR5P85299 388 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PSG6Q00889 435 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GUCY2DQ02846 1103 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CKAP4Q07065 602 aaKnown RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF763Q0D2J5 394 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RNPS1Q15287 305 aaKnown RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CHRFAM7AQ494W8 412 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CPTPQ5TA50 214 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HBMQ6B0K9 141 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ADAM5Q6NVV9 412 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 C8orf74Q6P047 294 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NPSR1Q6W5P4 371 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 STAC2Q6ZMT1 411 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MISPQ8IVT2 679 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR7G2Q8NG99 324 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR4N2Q8NGD1 307 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR5M1Q8NGP8 315 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZFP28Q8NHY6 868 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MUCL1Q96DR8 90 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CCDC126Q96EE4 140 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 C1QTNF3Q9BXJ4 246 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 VDAC3Q9Y277 283 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ACANP16112 2415 aa11□□□□□ -0.65
HLA-DQB3-203ENST00000425319 A8MT66 165 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MYO1GB0I1T2 1018 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 H3BNH8 94 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SCDO00767 359 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GMFGO60234 142 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 UTS2O95399 124 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GSTA1P08263 222 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 BMP4P12644 408 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PSMB1P20618 241 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 IMPDH1P20839 514 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LCN1P31025 176 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DUSP2Q05923 314 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GALNT18Q6P9A2 607 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TMEM107Q6UX40 140 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR6Y1Q8NGX8 325 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR10D3Q8NH80 312 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OR2V1Q8NHB1 315 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 FAM76AQ8TAV0 307 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ACTRT2Q8TDY3 377 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SMAP2Q8WU79 429 aaPredicted RBP10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RNF138Q8WVD3 245 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 OSTF1Q92882 214 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ADAD1Q96M93 576 aaKnown RBP10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF382Q96SR6 550 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HBEGFQ99075 208 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TAS2R7Q9NYW3 318 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF180Q9UJW8 692 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CLEC4AQ9UMR7 237 aa10.99□□□□□ -0.65
HLA-DQB3-203ENST00000425319 A0A087WUV0 522 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HMX2A2RU54 273 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TRIM49D1C9J1S8 452 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 H0YC42 278 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CXCL13O43927 109 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 AQP8O94778 261 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PRKD3O94806 890 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SOX30O94993 753 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NUDT14O95848 222 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ATP5F1P24539 256 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SERPINB4P48594 390 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PRKAG1P54619 331 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TPD52P55327 224 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DSCR9P59020 149 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SLC29A2Q14542 456 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 P2RY6Q15077 328 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NRF1Q16656 503 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CTU2Q2VPK5 515 aaKnown RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF678Q5SXM1 525 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HIPK1Q86Z02 1210 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DEPDC4Q8N2C3 294 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SLC43A2Q8N370 569 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CEP112Q8N8E3 955 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CDRT4Q8N9R6 151 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 KISS1RQ969F8 398 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CPNE4Q96A23 557 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ELP4Q96EB1 424 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZBED6CLQ96FA7 236 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RADILQ96JH8 1075 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MARK4Q96L34 752 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PAFAH2Q99487 392 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 AMBRA1Q9C0C7 1298 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 C12orf49Q9H741 205 aa10.98□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LRTM1Q9HBL6 345 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms