RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FADS1O60427 444 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 FCMRO60667 390 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 NPIPA8P0DM63 369 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 TBXA2RP21731 343 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 CPOXP36551 454 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 DCTP40126 519 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 MXRA7P84157 204 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 SLC25A3Q00325 362 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 SNTA1Q13424 505 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 GNA13Q14344 377 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF630Q2M218 657 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-202ENST00000422991 PLEKHN1Q494U1 663 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-202ENST00000422991 TBCELQ5QJ74 424 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 PRAMEF20Q5VT98 475 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 GALNTL5Q7Z4T8 443 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 ZZZ3Q8IYH5 903 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 PGAM4Q8N0Y7 254 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 POGLUT1Q8NBL1 392 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 OR4C3Q8NH37 302 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 TMEM19Q96HH6 336 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 ECSITQ9BQ95 431 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 OSBPL11Q9BXB4 747 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 ANGPTL4Q9BY76 406 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 UBQLN4Q9NRR5 601 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 NDE1Q9NXR1 346 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 CALML5Q9NZT1 146 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 MKLN1Q9UL63 735 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 AP3M1Q9Y2T2 418 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 L3MBTL1Q9Y468 752 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 DSPPQ9NZW4 1301 aa15.57■□□□□ 0.08
COL7A1-202ENST00000422991 SPENQ96T58 3664 aaKnown RBP15.57■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF462Q96JM2 2506 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 B2RBV5 119 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 G3V3Y1 287 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 ADAM10O14672 748 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 OXSR1O95747 527 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-202ENST00000422991 CNR1P21554 472 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 PTGDSP41222 190 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 CRISP3P54108 245 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 GAS1P54826 345 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 GPR85P60893 370 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 CHRNEQ04844 493 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 RBBP4Q09028 425 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 KLRB1Q12918 225 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 SCARB2Q14108 478 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 PRAMEF8Q5VWM4 474 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 PRAMEF7Q5VXH5 474 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 C16orf89Q6UX73 402 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF605Q86T29 641 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF619Q8N2I2 560 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 METTL25Q8N6Q8 603 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 Q8NA96 180 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 C11orf65Q8NCR3 313 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 RBM15BQ8NDT2 890 aaKnown RBP15.56■□□□□ 0.08
COL7A1-202ENST00000422991 NFKBIDQ8NI38 313 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF583Q96ND8 569 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 TREX2Q9BQ50 279 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-202ENST00000422991 HOXD1Q9GZZ0 328 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 GALNT9Q9HCQ5 603 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 SPAG4Q9NPE6 437 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 KLRF1Q9NZS2 232 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-202ENST00000422991 KCNE5Q9UJ90 142 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 BAHCC1Q9P281 2608 aa15.56■□□□□ 0.08
COL7A1-202ENST00000422991 GCN1Q92616 2671 aaKnown RBP15.55■□□□□ 0.08
COL7A1-202ENST00000422991 CENPVL1A0A0U1RR11 272 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 FAM220BPB1ANY3 271 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 B8ZZF3 427 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 ALG1L2C9J202 215 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 C5orf58C9J3I9 102 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 PEX1O43933 1283 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 PCGF2P35227 344 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 DNASE1L1P49184 302 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 ATP12AP54707 1039 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 CDK6Q00534 326 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 GPR68Q15743 365 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF141Q15928 474 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 INAQ16352 499 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 RPS26P11Q5JNZ5 115 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-202ENST00000422991 SLC30A6Q6NXT4 461 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 RPUSD3Q6P087 351 aaKnown RBP15.55■□□□□ 0.08
COL7A1-202ENST00000422991 APOOLQ6UXV4 268 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 RINLQ6ZS11 566 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 SULF2Q8IWU5 870 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 TEX19Q8NA77 164 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF527Q8NB42 609 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 OR2M7Q8NG81 312 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 BBS10Q8TAM1 723 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 OIT3Q8WWZ8 545 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 PMM1Q92871 262 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 REXO5Q96IC2 774 aaKnown RBP15.55■□□□□ 0.08
COL7A1-202ENST00000422991 FRMD6Q96NE9 622 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 FAM173AQ9BQD7 235 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 DOHHQ9BU89 302 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 PIF1Q9H611 641 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 BCL2L10Q9HD36 194 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 LUZP4Q9P127 313 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 TMEM181Q9P2C4 612 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 USP22Q9UPT9 525 aa15.55■□□□□ 0.08
COL7A1-202ENST00000422991 WIF1Q9Y5W5 379 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms