RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SARGQ9BW04 601 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 CDADC1Q9BWV3 514 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 CDCA4Q9BXL8 241 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ASPNQ9BXN1 380 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ATP13A2Q9NQ11 1180 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 SOHLH2Q9NX45 425 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 CNOT2Q9NZN8 540 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 PCOLCE2Q9UKZ9 415 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ALPK2Q86TB3 2170 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 A0A0J9YY10 115 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 HBQ1P09105 142 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 AZGP1P25311 298 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 SOX6P35712 828 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 SNRPGP62308 76 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 STX4Q12846 297 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 CCINQ13939 588 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 KLHL12Q53G59 568 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 DCST2Q5T1A1 773 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 MRPL2Q5T653 305 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 NANOGNBQ7Z5D8 188 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ZAR1Q86SH2 424 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 GHDCQ8N2G8 530 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 POC5Q8NA72 575 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 FAM83FQ8NEG4 500 aaPredicted RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 TSTD1Q8NFU3 115 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 OR4N2Q8NGD1 307 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 OR52I1Q8NGK6 324 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 NT5CQ8TCD5 201 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 GNPDA2Q8TDQ7 276 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 LMX1AQ8TE12 382 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 NECTIN4Q96NY8 510 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 RACGAP1Q9H0H5 632 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 MED20Q9H944 212 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 SLC25A19Q9HC21 320 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ANKHQ9HCJ1 492 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 QPCTLQ9NXS2 382 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 H2AFY2Q9P0M6 372 aaPredicted RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 SPTY2D1-AS1A0A0U1RR47 76 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ZC3H12DA2A288 527 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 CHST10O43529 356 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 GMFGO60234 142 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 GPR75O95800 540 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 IFNA16P05015 189 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 SAGP10523 405 aaPredicted RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 RPS7P62081 194 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 TUBA1BP68363 451 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 KIAA0895LQ68EN5 471 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 TUBA1AQ71U36 451 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 ZBTB8BQ8NAP8 495 aaPredicted RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 BBS1Q8NFJ9 593 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 OR51A7Q8NH64 312 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 DIO2Q92813 273 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 TM4SF19Q96DZ7 209 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 RBM18Q96H35 190 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 MAP3K3Q99759 626 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 LMAN1LQ9HAT1 526 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 HHATLQ9HCP6 504 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 USP36Q9P275 1121 aaKnown RBP10.2□□□□□ -0.78
DDX56-203ENST00000421223 PILRAQ9UKJ1 303 aa10.2□□□□□ -0.78
DDX56-203ENST00000421223 SPAG17Q6Q759 2223 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 METTL15A6NJ78 407 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 HRKO00198 91 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 CDC42EP2O14613 210 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 STX11O75558 287 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 DLGAP3O95886 979 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 THY1P04216 161 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 IFI30P13284 250 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 GSTM3P21266 225 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 SSTR4P31391 388 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 CD79BP40259 229 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 DAB2P98082 770 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 CD300CQ08708 224 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 IRF3Q14653 427 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 C22orf42Q6IC83 251 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 CADM2Q8N3J6 435 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 OR52R1Q8NGF1 315 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 PFN4Q8NHR9 129 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 ASB12Q8WXK4 309 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 TRMT61AQ96FX7 289 aaKnown RBP10.19□□□□□ -0.78
DDX56-203ENST00000421223 PTCHD1Q96NR3 888 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 TM9SF2Q99805 663 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 GDF15Q99988 308 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 FUZQ9BT04 418 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 MND1Q9BWT6 205 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 MMP27Q9H306 513 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 POT1Q9NUX5 634 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 C14orf119Q9NWQ9 140 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 MAU2Q9Y6X3 613 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 UNC13CQ8NB66 2214 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 A8MUA0 341 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 HOXC4P09017 264 aaPredicted RBP10.19□□□□□ -0.78
DDX56-203ENST00000421223 MTNR1AP48039 350 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 CDH11P55287 796 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 ZNF267Q14586 743 aaPredicted RBP10.19□□□□□ -0.78
DDX56-203ENST00000421223 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 LRIT3Q3SXY7 679 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 TIMM50Q3ZCQ8 353 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 USP53Q70EK8 1073 aa10.19□□□□□ -0.78
DDX56-203ENST00000421223 SAMD14Q8IZD0 417 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms