RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CD200R1Q8TD46 325 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 SLAMF9Q96A28 289 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 C2orf42Q9NWW7 574 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 GFOD1Q9NXC2 390 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 PCDHA9Q9Y5H5 950 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 KNDC1Q76NI1 1749 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 FAM230AA0A1W2PPH8 454 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 E9PI62 339 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 CRTAPO75718 401 aaPredicted RBP11.68□□□□□ -0.54
CLCN4-203ENST00000421085 RBMS1P29558 406 aaKnown RBP11.68□□□□□ -0.54
CLCN4-203ENST00000421085 TAS2R20P59543 309 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 WDR5P61964 334 aaKnown RBP11.68□□□□□ -0.54
CLCN4-203ENST00000421085 RING1Q06587 406 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 PLCXD2Q0VAA5 305 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 MPP7Q5T2T1 576 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 LILRA2Q8N149 483 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 STEAP2Q8NFT2 490 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 CREB3L4Q8TEY5 395 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 C4orf36Q96KX1 117 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 FIZ1Q96SL8 496 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 SIAEQ9HAT2 523 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 WASH6PQ9NQA3 447 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 INSL5Q9Y5Q6 135 aa11.68□□□□□ -0.54
CLCN4-203ENST00000421085 MYH7P12883 1935 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 OTOL1A6NHN0 477 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ARNTLO00327 626 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 RNASET2O00584 256 aaKnown RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 TGM6O95932 706 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SDC1P18827 310 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 EPHA1P21709 976 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 DBPQ10586 325 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 CRHR2Q13324 411 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF695Q8IW36 515 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SLC12A9Q9BXP2 914 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 HSBP1L1C9JCN9 74 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PPP6CO00743 305 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 HRGP04196 525 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 RPS17P08708 135 aaKnown RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PGCP20142 388 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 HRH2P25021 359 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PLP2Q04941 152 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 OR13F1Q8NGS4 319 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF417Q8TAU3 575 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 HAS2Q92819 552 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 GLTPQ9NZD2 209 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 CXXC1Q9P0U4 656 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 RCE1Q9Y256 329 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 MEGF11A6BM72 1044 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 TRIM64BA6NI03 449 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FABP7O15540 132 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 HEXBP07686 556 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ACRP10323 421 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 KCNJ5P48544 419 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 GRM2Q14416 872 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 OPCMLQ14982 345 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PIP5KL1Q5T9C9 394 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ARHGAP12Q8IWW6 846 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 TMEM102Q8N9M5 508 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 CCDC71LQ8N9Z2 235 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 GPR148Q8TDV2 347 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FOXRED1Q96CU9 486 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PCYT2Q99447 389 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 KRBOX1C9JBD0 128 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FRS3O43559 492 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 TMEM225BP0DP42 221 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PIM1P11309 404 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SOX4Q06945 474 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-203ENST00000421085 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 LMX1AQ8TE12 382 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FCRL1Q96LA6 429 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF416Q9BWM5 594 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 PINK1Q9BXM7 581 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 OLAHQ9NV23 265 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 CIB4A0PJX0 185 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SMLR1H3BR10 107 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 K7ERQ8 282 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FADS1O60427 444 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 NDUFB2O95178 105 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FUCA1P04066 466 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SPRYD7Q5W111 196 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 UNC5DQ6UXZ4 953 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 ZNF461Q8TAF7 563 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 MICU1Q9BPX6 476 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 FANCFQ9NPI8 374 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 SLAMF8Q9P0V8 285 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 V9GY05 133 aa11.67□□□□□ -0.54
CLCN4-203ENST00000421085 TSPAN11A1L157 253 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 MEIS3P2A8K0S8 358 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 ATP6V1G2-DDX39BF2Z307 99 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 MPIG6BO95866 241 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 GSRP00390 522 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 PPP3CBP16298 524 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 MMP12P39900 470 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 FASLGP48023 281 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 RAP2BP61225 183 aa11.66□□□□□ -0.54
CLCN4-203ENST00000421085 SIM1P81133 766 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms