RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CTBP2P56545 445 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 PRR5P85299 388 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 BTKQ06187 659 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 CAPRIN1Q14444 709 aaKnown RBP15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 ZNHIT3Q15649 155 aaPredicted RBP15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 LGSNQ5TDP6 509 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 TMEM107Q6UX40 140 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 OR2L13Q8N349 312 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 TMEM237Q96Q45 408 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 TMEM204Q9BSN7 226 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 TBL1XR1Q9BZK7 514 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
UPF3AP3-201ENST00000420996 SERTM1A2A2V5 107 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 CCDC151A5D8V7 595 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 TTC36A6NLP5 189 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 EIF1AYO14602 144 aaKnown RBP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 DLX3O60479 287 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 CRLF1O75462 422 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 UTS2O95399 124 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 ANGPTL1O95841 491 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 SNRPAP09012 282 aaKnown RBP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 EIF1AXP47813 144 aaKnown RBP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 PKNOX1P55347 436 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 ZNF763Q0D2J5 394 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 TNK1Q13470 666 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 FAM71E1Q6IPT2 247 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 BEND4Q6ZU67 534 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 ELP4Q96EB1 424 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 PLPPR2Q96GM1 343 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 LMF2Q9BU23 707 aaKnown RBP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 OR10A4Q9H209 315 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 GLIPR2Q9H4G4 154 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 C3orf14Q9HBI5 128 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 MIEF1Q9NQG6 463 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 DDX18Q9NVP1 670 aaKnown RBP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 PAQR5Q9NXK6 330 aaPredicted RBP15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 TMEM216Q9P0N5 145 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 CLEC4AQ9UMR7 237 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 TIMM22Q9Y584 194 aa15.1■□□□□ 0.01
UPF3AP3-201ENST00000420996 SHISA8B8ZZ34 492 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 SOX30O94993 753 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 ZNF17P17021 662 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 NTSP30990 170 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 RFX3P48380 749 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 ETF1P62495 437 aaKnown RBP15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 LCP2Q13094 533 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 SPDYAQ5MJ70 313 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 PPP4R4Q6NUP7 873 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 APOOLQ6UXV4 268 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 SYT10Q6XYQ8 523 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 WDR75Q8IWA0 830 aaKnown RBP15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 OR10D3Q8NH80 312 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 CDC26Q8NHZ8 85 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 AMDHD1Q96NU7 426 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 ACTR6Q9GZN1 396 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 HHATLQ9HCP6 504 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 GLRX2Q9NS18 164 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 MCTS1Q9ULC4 181 aaKnown RBP15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 VDAC3Q9Y277 283 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 GPR52Q9Y2T5 361 aa15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 WBP11Q9Y2W2 641 aaKnown RBP15.09■□□□□ 0.01
UPF3AP3-201ENST00000420996 A0A087WZY1 265 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 GMFGO60234 142 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 KCNH1O95259 989 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 IFI6P09912 130 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 ATP5F1P24539 256 aaPredicted RBP15.08■□□□□ 0
UPF3AP3-201ENST00000420996 GABRA3P34903 492 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 PRKAA2P54646 552 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 KRTAP1-1Q07627 177 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 CTU2Q2VPK5 515 aaKnown RBP15.08■□□□□ 0
UPF3AP3-201ENST00000420996 GRAMD1BQ3KR37 738 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 TIFABQ6ZNK6 161 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 STK32CQ86UX6 486 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 LCA5Q86VQ0 697 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 WFDC8Q8IUA0 241 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 SLC22A9Q8IVM8 553 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 GTPBP8Q8N3Z3 284 aaPredicted RBP15.08■□□□□ 0
UPF3AP3-201ENST00000420996 AKAP1Q92667 903 aaKnown RBP eCLIP15.08■□□□□ 0
UPF3AP3-201ENST00000420996 L3HYPDHQ96EM0 354 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 ADGRG7Q96K78 797 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 KCNA7Q96RP8 456 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 REPIN1Q9BWE0 567 aaKnown RBP15.08■□□□□ 0
UPF3AP3-201ENST00000420996 MYNNQ9NPC7 610 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 PRR14LQ5THK1 2151 aa15.08■□□□□ 0
UPF3AP3-201ENST00000420996 GXYLT2A0PJZ3 443 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 ADAMDEC1O15204 470 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 SYNGR4O95473 234 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 IGKV1D-16P01601 117 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 PSMB1P20618 241 aaKnown RBP15.07■□□□□ 0
UPF3AP3-201ENST00000420996 RAC1P63000 192 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 CKAP4Q07065 602 aaKnown RBP15.07■□□□□ 0
UPF3AP3-201ENST00000420996 HEPHL1Q6MZM0 1159 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 ADAM5Q6NVV9 412 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 FAM76AQ8TAV0 307 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 LAMP3Q9UQV4 416 aa15.07■□□□□ 0
UPF3AP3-201ENST00000420996 FBN1P35555 2871 aaKnown RBP15.07■□□□□ 0
UPF3AP3-201ENST00000420996 A0A087WUV0 522 aaPredicted RBP15.06■□□□□ 0
UPF3AP3-201ENST00000420996 C7orf72A4D263 438 aa15.06■□□□□ 0
UPF3AP3-201ENST00000420996 ALG1L2C9J202 215 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms