RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ZNF773Q6PK81 442 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 NAXDQ8IW45 347 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 PLPP5Q8NEB5 264 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 FBLIM1Q8WUP2 373 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 CTPS2Q9NRF8 586 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 MKL2Q9ULH7 1088 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 ZNF232Q9UNY5 417 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 FER1L5A0AVI2 2057 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 FGF5P12034 268 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 RYKP34925 604 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 ZNF136P52737 540 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 HOXC5Q00444 222 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 CD47Q08722 323 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 TOP3AQ13472 1001 aaPredicted RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 LARS2Q15031 903 aaKnown RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 NSDHLQ15738 373 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 CTU2Q2VPK5 515 aaKnown RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 C6orf141Q5SZD1 244 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 PPP1R3BQ86XI6 285 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 CCDC71Q8IV32 467 aaPredicted RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 TAGAPQ8N103 731 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 AQP11Q8NBQ7 271 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 STT3BQ8TCJ2 826 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 ZNF721Q8TF20 911 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 DIO2Q92813 273 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 PITX2Q99697 317 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 SLC7A5P2Q9GIP4 190 aa19.41■□□□□ 0.7
GPC1-202ENST00000420138 TRIM45Q9H8W5 580 aaPredicted RBP19.41■□□□□ 0.7
GPC1-202ENST00000420138 SH3PXD2BA1X283 911 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 BCAS1O75363 584 aaPredicted RBP19.4■□□□□ 0.7
GPC1-202ENST00000420138 CRHBPP24387 322 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 EEF1B2P24534 225 aaKnown RBP19.4■□□□□ 0.7
GPC1-202ENST00000420138 TTKP33981 857 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 SMIM11AP58511 58 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 LSM11P83369 360 aaKnown RBP eCLIP19.4■□□□□ 0.7
GPC1-202ENST00000420138 NNATQ16517 81 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 DCST1Q5T197 706 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 KCTD8Q6ZWB6 473 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 MPP4Q96JB8 637 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 ADNPQ9H2P0 1102 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 KLHL28Q9NXS3 571 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 PRODH2Q9UF12 536 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 SLC13A4Q9UKG4 626 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 POFUT2Q9Y2G5 429 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 CCDC88CQ9P219 2028 aa19.4■□□□□ 0.7
GPC1-202ENST00000420138 CDHR4A6H8M9 788 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 EFCAB7A8K855 629 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 FAAHO00519 579 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 THY1P04216 161 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 POU2F1P14859 743 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 MEP1AQ16819 746 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 FLYWCH1Q4VC44 716 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 MRPL2Q5T653 305 aaKnown RBP19.39■□□□□ 0.7
GPC1-202ENST00000420138 BROXQ5VW32 411 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 PODNL1Q6PEZ8 512 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 SHISA6Q6ZSJ9 500 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 MORN4Q8NDC4 146 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 SLC2A12Q8TD20 617 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 CLIP3Q96DZ5 547 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 CTRCQ99895 268 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 FNDC11Q9BVV2 318 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 IRF2BPLQ9H1B7 796 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 POLR1BQ9H9Y6 1135 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 Q9N2J8 555 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 NTNG1Q9Y2I2 539 aa19.39■□□□□ 0.7
GPC1-202ENST00000420138 NUP210LQ5VU65 1888 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 NPIPB9F8W1W9 429 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 PRKNO60260 465 aaPredicted RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 LRP3O75074 770 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 OXSR1O95747 527 aaPredicted RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 ZGLP1P0C6A0 271 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 CSTF2P33240 577 aaKnown RBP eCLIP19.39■□□□□ 0.69
GPC1-202ENST00000420138 RNF144AP50876 292 aaPredicted RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 RGS8P57771 180 aaPredicted RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 RPP38P78345 283 aaKnown RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 Q6ZPB1 254 aaPredicted RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 LANCL3Q6ZV70 420 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 PARP8Q8N3A8 854 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 SETD9Q8NE22 299 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 C7orf57Q8NEG2 295 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 GTPBP3Q969Y2 492 aaKnown RBP19.39■□□□□ 0.69
GPC1-202ENST00000420138 OR8D2Q9GZM6 311 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 PARD6AQ9NPB6 346 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 BLOC1S6Q9UL45 172 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 TMCC3Q9ULS5 477 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 CLCA3PQ9Y6N3 262 aa19.39■□□□□ 0.69
GPC1-202ENST00000420138 TTC36A6NLP5 189 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 C4orf47A7E2U8 309 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 PRG2P13727 222 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 RFX3P48380 749 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 GABARAPL2P60520 117 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 DCDP81605 110 aaKnown RBP19.38■□□□□ 0.69
GPC1-202ENST00000420138 PMS2P3Q13401 168 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 IL11RAQ14626 422 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 EIPR1Q53HC9 387 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 ENTPD8Q5MY95 495 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 LCN10Q6JVE6 187 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 PGBD2Q6P3X8 592 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 KLHL17Q6TDP4 642 aa19.38■□□□□ 0.69
GPC1-202ENST00000420138 BPHLQ86WA6 291 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms