RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 BPGMP07738 259 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 PEPDP12955 493 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 HK1P19367 917 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 GCKP35557 465 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 PEX19P40855 299 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 DGKQP52824 942 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 IST1P53990 364 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 CLDN20P56880 219 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 SORDQ00796 357 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 GANABQ14697 944 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 PTGR1Q14914 329 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 MLC1Q15049 377 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 ZNHIT3Q15649 155 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 DUSP5Q16690 384 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 C6orf136Q5SQH8 315 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 MFSD12Q6NUT3 480 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 EMBQ6PCB8 327 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 GALNT10Q86SR1 603 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 DDIASQ8IXT1 998 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 MREGQ8N565 214 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 CDRT4Q8N9R6 151 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 OR7A2PQ8NGA2 310 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 OR5M1Q8NGP8 315 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 OR4C3Q8NH37 302 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 ZFP28Q8NHY6 868 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 LINC01560Q8TB33 94 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 FBXO30Q8TB52 745 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 AGR3Q8TD06 166 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 GPR151Q8TDV0 419 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 ZDHHC16Q969W1 377 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 INTS12Q96CB8 462 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 FAM120BQ96EK7 910 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 ZBED6CLQ96FA7 236 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 C16orf58Q96GQ5 468 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 MS4A4EQ96PG1 132 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 POLDIP3Q9BY77 421 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 IQCGQ9H095 443 aaKnown RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 GALNT8Q9NY28 637 aa9.96□□□□□ -0.82
SSBP3-206ENST00000420121 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-206ENST00000420121 ACANP16112 2415 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 FLNAP21333 2647 aaKnown RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 A0A1W2PNV4 684 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 A8MXE2 369 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 ALG1L2C9J202 215 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 EMC8O43402 210 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 PEX11AO75192 247 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 KCNK2O95069 426 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 OXSR1O95747 527 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 NGFRP08138 427 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 LAMP1P11279 417 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 EPXP11678 715 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 PSMA4P25789 261 aaKnown RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 GPC1P35052 558 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 SERPINB5P36952 375 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 ASMTP46597 345 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 RFX3P48380 749 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 PRKAG1P54619 331 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 MANFP55145 182 aaKnown RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF844Q08AG5 666 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 GUSBP1Q15486 140 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 GLYR1Q49A26 553 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 RAET1LQ5VY80 246 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 LUZP2Q86TE4 346 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 GGNQ86UU5 652 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 CDC20BQ86Y33 519 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 GRAMD2AQ8IUY3 354 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 RIMKLAQ8IXN7 391 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 UBQLNLQ8IYU4 475 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 PSMA8Q8TAA3 256 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 FIG4Q92562 907 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 SLC9A6Q92581 669 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 STARD4Q96DR4 205 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 OTUB1Q96FW1 271 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 PPP3R2Q96LZ3 170 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 C1orf50Q9BV19 199 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 RBM24Q9BX46 236 aaKnown RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 CXXC4Q9H2H0 198 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 CLEC4MQ9H2X3 399 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 C3orf14Q9HBI5 128 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 EML4Q9HC35 981 aaKnown RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 SDHAF3Q9NRP4 125 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 MRTO4Q9UKD2 239 aaKnown RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 RAI1Q7Z5J4 1906 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-206ENST00000420121 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
SSBP3-206ENST00000420121 TUBAL3A6NHL2 446 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 ITM2AO43736 263 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 SKAP2O75563 359 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 LYPLA1O75608 230 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 KCNH1O95259 989 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 SLU7O95391 586 aaKnown RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 CGAP01215 116 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 HMGN2P05204 90 aaKnown RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 DHRS4L1P0CG22 281 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms