RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SGCZQ96LD1 299 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF681Q96N22 645 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 LRRC37BQ96QE4 947 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 VRK1Q99986 396 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 MECRQ9BV79 373 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ENKD1Q9H0I2 346 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 TMEM140Q9NV12 185 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 MAT2BQ9NZL9 334 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 UTS2RQ9UKP6 389 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 PSME2Q9UL46 239 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 OAZ3Q9UMX2 235 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 CCL27Q9Y4X3 112 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 POLR3HQ9Y535 204 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 PTGDR2Q9Y5Y4 395 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF780BQ9Y6R6 833 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 CROCCQ5TZA2 2017 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ADGRG4Q8IZF6 3080 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CRYBG3Q68DQ2 2970 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 A0A1W2PRX2 142 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 A1L4Q6 167 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 TMEM233B4DJY2 109 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 NPIPB8E9PQR5 432 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 RGS16O15492 202 aaPredicted RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 RGS14O43566 566 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ASNA1O43681 348 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 HS6ST1O60243 411 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CDC14BO60729 498 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 TUBBP07437 444 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CHRNGP07510 517 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ANXA4P09525 319 aaPredicted RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CCL3P10147 92 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 GP1BBP13224 206 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 BMP7P18075 431 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 S1PR1P21453 382 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 GPX3P22352 226 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 PRPH2P23942 346 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CA7P43166 264 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 GSTM5P46439 218 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 DNASE1L1P49184 302 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 NR0B1P51843 470 aaKnown RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 MRPS35P82673 323 aaKnown RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 HEPACAMQ14CZ8 416 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CEBPEQ15744 281 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF628Q5EBL2 1059 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CMPK2Q5EBM0 449 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ARL13AQ5H913 290 aaPredicted RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 RNF165Q6ZSG1 346 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ZCCHC23Q6ZST2 131 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 FAM47EQ6ZV65 393 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CHERPQ8IWX8 916 aaKnown RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 DND1Q8IYX4 353 aaKnown RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 TAGAPQ8N103 731 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 GHDCQ8N2G8 530 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 SLC15A4Q8N697 577 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 SIMC1Q8NDZ2 872 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 C17orf47Q8NEP4 570 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 OR2M7Q8NG81 312 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 OR10G3Q8NGC4 313 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 OR9A2Q8NGT5 310 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 OR2T11Q8NH01 316 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 C16orf52Q8NHV5 167 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CDC26Q8NHZ8 85 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF675Q8TD23 568 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 PAQR8Q8TEZ7 354 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 EXOSC8Q96B26 276 aaKnown RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CTHRC1Q96CG8 243 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ZIM3Q96PE6 472 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 TTTY12Q9BZ98 90 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 TUBB1Q9H4B7 451 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 EML4Q9HC35 981 aaKnown RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 SH2D2AQ9NP31 389 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 MYNNQ9NPC7 610 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 RRAGDQ9NQL2 400 aaPredicted RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 PFDN4Q9NQP4 134 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 SACM1LQ9NTJ5 587 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 EHD3Q9NZN3 535 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 SENP1Q9P0U3 644 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 PLEKHB1Q9UF11 243 aaPredicted RBP6.35□□□□□ -1.39
HMGN1-205ENST00000419378 SH3BGRL2Q9UJC5 107 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ENTPD4Q9Y227 616 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 DTX4Q9Y2E6 619 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF835Q9Y2P0 537 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 FIS1Q9Y3D6 152 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 DNAJC15Q9Y5T4 150 aa6.35□□□□□ -1.39
HMGN1-205ENST00000419378 CENPEQ02224 2701 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FAM166BA8MTA8 275 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 MYO1GB0I1T2 1018 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SLC28A1O00337 649 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SLC16A6O15403 523 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ZNHIT1O43257 154 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CDC40O60508 579 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ZG16O60844 167 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 SEC22BO75396 215 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 GLSO94925 669 aaPredicted RBP6.34□□□□□ -1.39
HMGN1-205ENST00000419378 CHEK2O96017 543 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 P04436 131 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 BPGMP07738 259 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 FGF4P08620 206 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 NEFHP12036 1026 aa6.34□□□□□ -1.39
HMGN1-205ENST00000419378 ABOP16442 354 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms