RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ZNF24P17028 368 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PEBP1P30086 187 aaKnown RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 OR10A3P58181 314 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 ARHGAP19Q14CB8 494 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 MINDY4Q4G0A6 757 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 AGBL4Q5VU57 503 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3GQ6DHY5 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3CQ6IPX1 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 GDF7Q7Z4P5 450 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D3Q8IZP1 549 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TMEM99Q8N816 258 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 LILRB4Q8NHJ6 448 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PCBD2Q9H0N5 130 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 RPRD1BQ9NQG5 326 aaKnown RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 C20orf141Q9NUB4 165 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 WSB2Q9NYS7 404 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 MAT2BQ9NZL9 334 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TNFRSF10DQ9UBN6 386 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 GRIP1Q9Y3R0 1128 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 ALG5Q9Y673 324 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 SIRT4Q9Y6E7 314 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 MN1Q10571 1320 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 A0A0G2JMP0 313 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 A0A0X1KG70 313 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 A0A1W2PQU0 124 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 EMC8O43402 210 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 AKR7A2O43488 359 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 FGF19O95750 216 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 F3P13726 295 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 OMPP47874 163 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TSPAN31Q12999 210 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 NDUFA9Q16795 377 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TRMT12Q53H54 448 aaKnown RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 BHLHB9Q6PI77 547 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 ADAMTSL4Q6UY14 1074 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 FRMD1Q8N878 549 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 OR13C5Q8NGS8 318 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 SETD6Q8TBK2 473 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 DIO2Q92813 273 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 RELTQ969Z4 430 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 ARHGAP9Q9BRR9 750 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PINK1Q9BXM7 581 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 BEX1Q9HBH7 125 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PHPT1Q9NRX4 125 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 EXTL2Q9UBQ6 330 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 STON1Q9Y6Q2 735 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TRAV6A0A075B6T7 132 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 A0A0B4J203 849 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PEX12O00623 359 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 SAGP10523 405 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 GSTM3P21266 225 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 SHC1P29353 583 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 GABRA5P31644 462 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 HCCSP53701 268 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PDGFRLQ15198 375 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 SLC48A1Q6P1K1 146 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 KLHL36Q8N4N3 616 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 OR2L5Q8NG80 312 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 LCN9Q8WX39 176 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 PHF21AQ96BD5 680 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 KXD1Q9BQD3 176 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 CCDC86Q9H6F5 360 aaKnown RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 MCUBQ9NWR8 336 aa11.11□□□□□ -0.63
LIMK1-202ENST00000418310 USP36Q9P275 1121 aaKnown RBP11.11□□□□□ -0.63
LIMK1-202ENST00000418310 TRAV27A0A087WT01 109 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 A0A0G2JPF8 293 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 HMX3A6NHT5 357 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 HNRNPCL2B2RXH8 293 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 HNRNPCL3B7ZW38 293 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 HNRNPCL4P0DMR1 293 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ERGP11308 486 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 PVRP15151 417 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 IFNGR2P38484 337 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 CDK10Q15131 360 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 PGGHGQ32M88 737 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 CDC73Q6P1J9 531 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 CXXC5Q7LFL8 322 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 PRSS41Q7RTY9 318 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 CLDN22Q8N7P3 220 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 OR56A1Q8NGH5 318 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 HCAR2Q8TDS4 363 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 AP3S1Q92572 193 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 UPRTQ96BW1 309 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 FGF22Q9HCT0 170 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 TRPV5Q9NQA5 729 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 E9PI62 339 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 SURF4O15260 269 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 GJA4P35212 333 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 SRP9P49458 86 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 MAPK14Q16539 360 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 DUSP5Q16690 384 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 LYPD8Q6UX82 237 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms