RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 KLHL28Q9NXS3 571 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 SLC13A4Q9UKG4 626 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 PCDHGA10Q9Y5H3 936 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 RIF1Q5UIP0 2472 aaKnown RBP19.21■□□□□ 0.67
CASC3-203ENST00000418132 NPIPA5A0A0B4J1W7 369 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 NPIPA7E9PJI5 369 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 NPIPB9F8W1W9 429 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 TNFRSF11BO00300 401 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 NPIPA8P0DM63 369 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 PRKACGP22612 351 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 RFX3P48380 749 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 EIPR1Q53HC9 387 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 C6orf15Q6UXA7 325 aaPredicted RBP19.21■□□□□ 0.67
CASC3-203ENST00000418132 DEF8Q6ZN54 512 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 CYP4Z1Q86W10 505 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 APCDD1LQ8NCL9 501 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 OR4C15Q8NGM1 316 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 LPAR4Q99677 370 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 RBM4BQ9BQ04 359 aaKnown RBP19.21■□□□□ 0.67
CASC3-203ENST00000418132 RBM4Q9BWF3 364 aaKnown RBP19.21■□□□□ 0.67
CASC3-203ENST00000418132 ANKRD60Q9BZ19 345 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 WWTR1Q9GZV5 400 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 ACER3Q9NUN7 267 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 RLIMQ9NVW2 624 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 PADI1Q9ULC6 663 aa19.21■□□□□ 0.67
CASC3-203ENST00000418132 KNTC1P50748 2209 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 LOC102723996A0A087X1L8 192 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 CLDN24A6NM45 220 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 UMODP07911 640 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 PAX7P23759 505 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 LIMS1P48059 325 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 CDH12P55289 794 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 NPTX1Q15818 432 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 SLC29A4Q7RTT9 530 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 TIPARPQ7Z3E1 657 aaKnown RBP19.2■□□□□ 0.66
CASC3-203ENST00000418132 ZNF441Q8N8Z8 693 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 OR2Y1Q8NGV0 311 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 DHRS1Q96LJ7 313 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 FAM192AQ9GZU8 254 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 SMURF2Q9HAU4 748 aa19.2■□□□□ 0.66
CASC3-203ENST00000418132 SMPD3Q9NY59 655 aaPredicted RBP19.2■□□□□ 0.66
CASC3-203ENST00000418132 SPAARA0A1B0GVQ0 90 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 PRKNO60260 465 aaPredicted RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 CD63P08962 238 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 CSRP1P21291 193 aaKnown RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 GANABQ14697 944 aaKnown RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 ZNF141Q15928 474 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 DECR1Q16698 335 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 C3orf38Q5JPI3 329 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 TMEM164Q5U3C3 297 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 C17orf47Q8NEP4 570 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 PHF10Q8WUB8 498 aaKnown RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 GAL3ST4Q96RP7 486 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 YIPF3Q9GZM5 350 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 ZNF223Q9UK11 482 aaPredicted RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 A4GNTQ9UNA3 340 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 PTRH2Q9Y3E5 179 aaKnown RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 CDHR4A6H8M9 788 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 TO15178 435 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 GADD45GO95257 159 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 CCNYL3P0C7X3 344 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 LAPTM4AQ15012 233 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 FAM69BQ5VUD6 431 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 HLA-DQA1Q5Y7H0 255 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 CACTIN-AS1Q8N1I8 211 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 C8orf44Q96CB5 159 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 RDH12Q96NR8 316 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 LMF1Q96S06 567 aa19.19■□□□□ 0.66
CASC3-203ENST00000418132 NMNAT1Q9HAN9 279 aaPredicted RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 PDP1Q9P0J1 537 aaPredicted RBP19.19■□□□□ 0.66
CASC3-203ENST00000418132 IL33O95760 270 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 FUT4P22083 530 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 ATP12AP54707 1039 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 PSMD4P55036 377 aaKnown RBP19.18■□□□□ 0.66
CASC3-203ENST00000418132 MERTKQ12866 999 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 COLEC12Q5KU26 742 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 MRPL2Q5T653 305 aaKnown RBP19.18■□□□□ 0.66
CASC3-203ENST00000418132 ANKRD34AQ69YU3 496 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 OR52J3Q8NH60 311 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 VMP1Q96GC9 406 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 PRRC1Q96M27 445 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 RHCGQ9UBD6 479 aa19.18■□□□□ 0.66
CASC3-203ENST00000418132 PCDH17O14917 1159 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 FRS3O43559 492 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 TPST2O60704 377 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 SEC24DO94855 1032 aaPredicted RBP19.17■□□□□ 0.66
CASC3-203ENST00000418132 RNF4P78317 190 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 EXOC3L2Q2M3D2 409 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 PDZK1Q5T2W1 519 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 KRT80Q6KB66 452 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 HSDL2Q6YN16 418 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 TSPYL5Q86VY4 417 aaPredicted RBP19.17■□□□□ 0.66
CASC3-203ENST00000418132 PIK3C3Q8NEB9 887 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 OIT3Q8WWZ8 545 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 ADI1Q9BV57 179 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 NRSN2Q9GZP1 204 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 ARMC7Q9H6L4 198 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 FOXJ2Q9P0K8 574 aa19.17■□□□□ 0.66
CASC3-203ENST00000418132 TMEFF2Q9UIK5 374 aaPredicted RBP19.17■□□□□ 0.66
CASC3-203ENST00000418132 MRTO4Q9UKD2 239 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms