RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 LOC102723532A0A0G2JNH3 316 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 GSAPA4D1B5 854 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 BTN3A3O00478 584 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 SEC14L5O43304 696 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 PRICKLE3O43900 615 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-208ENST00000417496 KAT7O95251 611 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF24P17028 368 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 SIM1P81133 766 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-208ENST00000417496 QPRTQ15274 297 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 GPR68Q15743 365 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.25
HDAC9-208ENST00000417496 FAM27D1Q5T7N8 215 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 TRIQKQ629K1 86 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 PLET1Q6UQ28 207 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 NOXA1Q86UR1 476 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 SFXN5Q8TD22 340 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 SMARCD2Q92925 531 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 SLX1AQ9BQ83 275 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 DPH1Q9BZG8 443 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 RNF32Q9H0A6 362 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 PPIL3Q9H2H8 161 aaKnown RBP13.52□□□□□ -0.25
HDAC9-208ENST00000417496 C11orf49Q9H6J7 331 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 THAP10Q9P2Z0 257 aaPredicted RBP13.52□□□□□ -0.25
HDAC9-208ENST00000417496 STON1Q9Y6Q2 735 aa13.52□□□□□ -0.25
HDAC9-208ENST00000417496 NPIPA5A0A0B4J1W7 369 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ANKRD34BA5PLL1 514 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 OR6C70A6NIJ9 312 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 NPIPA7E9PJI5 369 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 SYT5O00445 386 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 NPIPA8P0DM63 369 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 TBXA2RP21731 343 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 GJA4P35212 333 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 GCGRP47871 477 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 EVX1P49640 407 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 DSG2Q14126 1118 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 PDGFRLQ15198 375 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 PGGHGQ32M88 737 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 FCRLBQ6BAA4 426 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 FRRS1Q6ZNA5 592 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF620Q6ZNG0 422 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 OSTF1Q92882 214 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 BADQ92934 168 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 GDF15Q99988 308 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ACTRT3Q9BYD9 372 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 TRIM45Q9H8W5 580 aaPredicted RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 SMLR1H3BR10 107 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 SLC31A1O15431 190 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ZGLP1P0C6A0 271 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 FPR3P25089 353 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 MAP2K3P46734 347 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 SEC13P55735 322 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ERVK-21P61565 698 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 PPP3R1P63098 170 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 RPE65Q16518 533 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF322Q6U7Q0 402 aaPredicted RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 WDR88Q6ZMY6 472 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 KLHL36Q8N4N3 616 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 YIPF7Q8N8F6 280 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 PFN4Q8NHR9 129 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 RFKQ969G6 155 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 WACQ9BTA9 647 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 UBQLN3Q9H347 655 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 PHPT1Q9NRX4 125 aaPredicted RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 C20orf141Q9NUB4 165 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 FBXO34Q9NWN3 711 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 KLHL28Q9NXS3 571 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 H2AFY2Q9P0M6 372 aaPredicted RBP13.51□□□□□ -0.25
HDAC9-208ENST00000417496 TNFRSF10DQ9UBN6 386 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 F5P12259 2224 aa13.51□□□□□ -0.25
HDAC9-208ENST00000417496 AKAP8O43823 692 aaKnown RBP13.5□□□□□ -0.25
HDAC9-208ENST00000417496 REM1O75628 298 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 CSTF1Q05048 431 aaKnown RBP13.5□□□□□ -0.25
HDAC9-208ENST00000417496 MAPK14Q16539 360 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 DUSP5Q16690 384 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 DEFB134Q4QY38 66 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 TRMT12Q53H54 448 aaKnown RBP13.5□□□□□ -0.25
HDAC9-208ENST00000417496 IDNKQ5T6J7 187 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 VN1R4Q7Z5H5 301 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 OR2T33Q8NG76 320 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 SOSTQ9BQB4 213 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 ALG5Q9Y673 324 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 A0A0G2JMP0 313 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 A0A0X1KG70 313 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 IRGMA1A4Y4 181 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF860A6NHJ4 632 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 C12orf71A8MTZ7 269 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 FAM25AB3EWG3 89 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 FAM25CB3EWG5 89 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms