RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 RTL4Q6ZR62 310 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 LRRC75A-AS1Q8N1F1 130 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 ARFGAP2Q8N6H7 521 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 FAM13CQ8NE31 585 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 CEP70Q8NHQ1 597 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 SLC22A8Q8TCC7 542 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 ZBED6CLQ96FA7 236 aaPredicted RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 C16orf58Q96GQ5 468 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 YIPF4Q9BSR8 244 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 EXO5Q9H790 373 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 CXorf36Q9H7Y0 433 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 SIRT3Q9NTG7 399 aaPredicted RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 DDX18Q9NVP1 670 aaKnown RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 ZNF629Q9UEG4 869 aaPredicted RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 C19orf53Q9UNZ5 99 aaPredicted RBP16.34■□□□□ 0.21
VCP-202ENST00000417448 SNX8Q9Y5X2 465 aa16.34■□□□□ 0.21
VCP-202ENST00000417448 DYNC1I1O14576 645 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 UBDO15205 165 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 CFLARO15519 480 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 GOSR1O95249 250 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 CPSF4O95639 269 aaKnown RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 RFPL3SP0C7P2 107 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 RPL3P39023 403 aaKnown RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 SORDQ00796 357 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 RPS6KA2Q15349 733 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 ZNF791Q3KP31 576 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 ACSF3Q4G176 576 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 BICRALQ6AI39 1079 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 OPN5Q6U736 354 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 SLC44A2Q8IWA5 706 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 FBXW8Q8N3Y1 598 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 NUP43Q8NFH3 380 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 OR10G3Q8NGC4 313 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 OR9I1Q8NGQ6 314 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 OR5AK3PQ8NH89 298 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 ZFP28Q8NHY6 868 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 ZNF764Q96H86 408 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 LCORQ96JN0 433 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 BDH2Q9BUT1 245 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 SLC6A15Q9H2J7 730 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 ZNF703Q9H7S9 590 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 TCF7L2Q9NQB0 619 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 ACSS1Q9NUB1 689 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 FGFR1OP2Q9NVK5 253 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 GPR55Q9Y2T6 319 aaPredicted RBP16.33■□□□□ 0.2
VCP-202ENST00000417448 PCDHGB3Q9Y5G1 929 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 NPFFR2Q9Y5X5 522 aa16.33■□□□□ 0.2
VCP-202ENST00000417448 RNF212BA8MTL3 300 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 PLOD2O00469 737 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 SMPD2O60906 423 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 ERN1O75460 977 aaKnown RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 CRLF1O75462 422 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 C1QCP02747 245 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 VIMP08670 466 aaKnown RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 FBXO45P0C2W1 286 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 CT45A8P0DMV1 189 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 CT45A9P0DMV2 189 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 PIGAP37287 484 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 MDH1P40925 334 aaKnown RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 AGFG1P52594 562 aaKnown RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 FAM174BQ3ZCQ3 159 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 CT45A2Q5DJT8 189 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 PRAMEF20Q5VT98 475 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 CGB2Q6NT52 195 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 KIF18BQ86Y91 864 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 LRRC34Q8IZ02 419 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 TAGAPQ8N103 731 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 OR2L13Q8N349 312 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 GOLM1Q8NBJ4 401 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 TP53INP1Q96A56 240 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 SPACA9Q96E40 222 aaPredicted RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 VSTM2LQ96N03 204 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 PRPF18Q99633 342 aaKnown RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 BHLHE41Q9C0J9 482 aaPredicted RBP16.32■□□□□ 0.2
VCP-202ENST00000417448 SACM1LQ9NTJ5 587 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 ATAD3AQ9NVI7 634 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 PRODH2Q9UF12 536 aa16.32■□□□□ 0.2
VCP-202ENST00000417448 A0A087WV62 115 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 POLR3GO15318 223 aaPredicted RBP16.31■□□□□ 0.2
VCP-202ENST00000417448 SCN2BO60939 215 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 BCAS2O75934 225 aaPredicted RBP16.31■□□□□ 0.2
VCP-202ENST00000417448 EPPINO95925 133 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 ABCD3P28288 659 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 SOAT1P35610 550 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 PPICP45877 212 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 CASP9P55211 416 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 C21orf58P58505 322 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 HBA1P69905 142 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 PRSS57Q6UWY2 283 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 GALNT10Q86SR1 603 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 OR5P2Q8WZ92 322 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 TMBIM1Q969X1 311 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 OMA1Q96E52 524 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 FAM120BQ96EK7 910 aaKnown RBP16.31■□□□□ 0.2
VCP-202ENST00000417448 PIP5K1AQ99755 562 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 TAS2R9Q9NYW1 312 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 CFL2Q9Y281 166 aa16.31■□□□□ 0.2
VCP-202ENST00000417448 DSCAMO60469 2012 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms