RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 FRKP42685 505 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-208ENST00000417285 PRR5P85299 388 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 KRT71Q3SY84 523 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 RAET1LQ5VY80 246 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 LRIG3Q6UXM1 1119 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 P4HA3Q7Z4N8 544 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 MARCH3Q86UD3 253 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 CDRT4Q8N9R6 151 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 GPR151Q8TDV0 419 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 HOXB13Q92826 284 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-208ENST00000417285 PIGQQ9BRB3 760 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 LIME1Q9H400 295 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 PACSIN3Q9UKS6 424 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 IGLV3-32A0A0A0MS00 114 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 SLC22A20A6NK97 555 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 A8MXE2 369 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 TNFRSF21O75509 655 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 UTS2O95399 124 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 TGM6O95932 706 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 TCEA1P23193 301 aaKnown RBP22.88■■□□□ 1.25
VEGFA-208ENST00000417285 RPL3P39023 403 aaKnown RBP22.88■■□□□ 1.25
VEGFA-208ENST00000417285 MAP3K8P41279 467 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 RFX3P48380 749 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 PCYT1AP49585 367 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 PRKAG1P54619 331 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 OCRLQ01968 901 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 STX5Q13190 355 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 ATP6AP1LQ52LC2 224 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 XKR7Q5GH72 579 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 SZRD1Q7Z422 152 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 CAMKMTQ7Z624 323 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 LUZP2Q86TE4 346 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 GCNT2Q8N0V5 402 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 NUP43Q8NFH3 380 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 C1GALT1C1Q96EU7 318 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 PARD6BQ9BYG5 372 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 GALNT8Q9NY28 637 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 STOML1Q9UBI4 398 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 NDRG3Q9UGV2 375 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 ZNF337Q9Y3M9 751 aa22.88■■□□□ 1.25
VEGFA-208ENST00000417285 KIAA1549Q9HCM3 1950 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 A0A1W2PNV4 684 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 MSTNO14793 375 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 RGS16O15492 202 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-208ENST00000417285 CTIFO43310 598 aaKnown RBP22.87■■□□□ 1.25
VEGFA-208ENST00000417285 PEX11AO75192 247 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 NKX2-2O95096 273 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 ZCCHC12Q6PEW1 402 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 PPP1R14CQ8TAE6 165 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 MS4A4EQ96PG1 132 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 YIPF4Q9BSR8 244 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 RTN4RQ9BZR6 473 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 FLRT3Q9NZU0 649 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 ZDHHC2Q9UIJ5 367 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 AP4B1Q9Y6B7 739 aa22.87■■□□□ 1.25
VEGFA-208ENST00000417285 NIPBLQ6KC79 2804 aaeCLIP22.86■■□□□ 1.252e-6■■□□□ 11.5
VEGFA-208ENST00000417285 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 GXYLT2A0PJZ3 443 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 OR2M5A3KFT3 312 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 C17orf51A8MQB3 221 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 CASKO14936 926 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 TNFSF13O75888 250 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 ANGPTL1O95841 491 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 NGFRP08138 427 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 LCN1P31025 176 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 ARRB2P32121 409 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 ETV4P43268 484 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 PLXDC2Q6UX71 529 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 NUDCD3Q8IVD9 361 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 UBQLNLQ8IYU4 475 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 OR6Y1Q8NGX8 325 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 MBD6Q96DN6 1003 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 ATP6V1HQ9UI12 483 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 ZNF175Q9Y473 711 aa22.86■■□□□ 1.25
VEGFA-208ENST00000417285 PRRC2AP48634 2157 aaKnown RBP22.85■■□□□ 1.25
VEGFA-208ENST00000417285 SCAMP2O15127 329 aaKnown RBP22.85■■□□□ 1.25
VEGFA-208ENST00000417285 EMC8O43402 210 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 SKAP2O75563 359 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-208ENST00000417285 ZNF844Q08AG5 666 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 FGFBP1Q14512 234 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 MLC1Q15049 377 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 FNDC5Q8NAU1 212 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 PIK3R3Q92569 461 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 SLC9A6Q92581 669 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 GIMAP2Q9UG22 337 aa22.85■■□□□ 1.25
VEGFA-208ENST00000417285 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 LYPLA1O75608 230 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-208ENST00000417285 IGKV1D-16P01601 117 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 TBXA2RP21731 343 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 SERPINB4P48594 390 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 CLDN15P56746 228 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 RPS3AP61247 264 aaKnown RBP22.84■■□□□ 1.25
VEGFA-208ENST00000417285 GRAMD1BQ3KR37 738 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 EXOC3L1Q86VI1 746 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 FAM110BQ8TC76 370 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 STARD4Q96DR4 205 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 GIMAP5Q96F15 307 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 C3orf30Q96M34 536 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 ALPK1Q96QP1 1244 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 C1orf50Q9BV19 199 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms