RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 ATP13A3Q9H7F0 1226 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 BRF2Q9HAW0 419 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 KCNK13Q9HB14 408 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 MKKSQ9NPJ1 570 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-202ENST00000415828 SLC6A13Q9NSD5 602 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 ANO10Q9NW15 660 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 SMARCAL1Q9NZC9 954 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 ZNF224Q9NZL3 707 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 STOX2Q9P2F5 926 aaPredicted RBP4.33□□□□□ -1.72
CSTF1-202ENST00000415828 SLC24A2Q9UI40 661 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 HOOK1Q9UJC3 728 aaKnown RBP4.33□□□□□ -1.72
CSTF1-202ENST00000415828 NXT1Q9UKK6 140 aaKnown RBP4.33□□□□□ -1.72
CSTF1-202ENST00000415828 HPCAL4Q9UM19 191 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 ICAM5Q9UMF0 924 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 ERVK-11Q9UQG0 969 aa4.33□□□□□ -1.72
CSTF1-202ENST00000415828 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 DMBT1Q9UGM3 2413 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 LOC102723996A0A087X1L8 192 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 FAM170AA1A519 330 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MAGEA13PA6NCF6 341 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 HNRNPCL2B2RXH8 293 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 PTGES3LE9PB15 166 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 BUB3O43684 328 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 HNRNPCL1O60812 293 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MTX2O75431 263 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 CD8AP01732 235 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 IGHG3P01860 377 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 SLC25A16P16260 332 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ALOX12P18054 663 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 HLA-DPA1P20036 260 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 TPSB2P20231 275 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 PTNP21246 168 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 CPOXP36551 454 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ARL1P40616 181 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MAGEA5P43359 124 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 GCLMP48507 274 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 RPL34P49207 117 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 EMP2P54851 167 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 KRTAP10-3P60369 221 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 UBA52P62987 128 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 BCL2L1Q07817 233 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 TMEM115Q12893 351 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 GGTLC2Q14390 218 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 SIX1Q15475 284 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MED22Q15528 200 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 OASLQ15646 514 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 TPSAB1Q15661 275 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 GSTA3Q16772 222 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ZNF718Q3SXZ3 478 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ARMC12Q5T9G4 340 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 WLSQ5T9L3 541 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ASPHD2Q6ICH7 369 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 LRRC31Q6UY01 552 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ADAMTSL5Q6ZMM2 481 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 QSOX2Q6ZRP7 698 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 LANCL3Q6ZV70 420 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 SH2D5Q6ZV89 423 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 USP43Q70EL4 1123 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 IKBIPQ70UQ0 350 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 C10orf105Q8TEF2 133 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 CCDC47Q96A33 483 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 RSRC1Q96IZ7 334 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 HSFY1Q96LI6 401 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 ZNF385AQ96PM9 386 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MED18Q9BUE0 208 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MAGEF1Q9HAY2 307 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 HINT3Q9NQE9 182 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 IMP3Q9NV31 184 aaKnown RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 RMND1Q9NWS8 449 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 TAB2Q9NYJ8 693 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 MKLN1Q9UL63 735 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 CORO1CQ9ULV4 474 aaPredicted RBP4.32□□□□□ -1.72
CSTF1-202ENST00000415828 NEU3Q9UQ49 428 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 VDAC3Q9Y277 283 aa4.32□□□□□ -1.72
CSTF1-202ENST00000415828 IGHV4-61A0A0C4DH41 118 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 A0A0G2JPF8 293 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 PVALEFA0A1B0GWK0 134 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 HNRNPCL3B7ZW38 293 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 G3V3Y1 287 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 FAM72CH0Y354 149 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 PSMD11O00231 422 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 CHUKO15111 745 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 ZNF354AO60765 605 aaPredicted RBP4.31□□□□□ -1.72
CSTF1-202ENST00000415828 LDB3O75112 727 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 SOCS5O75159 536 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 LY6HO94772 140 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 LETM1O95202 739 aaPredicted RBP4.31□□□□□ -1.72
CSTF1-202ENST00000415828 CLDN9O95484 217 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 HNRNPCL4P0DMR1 293 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 VDRP11473 427 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 CXCR2P25025 360 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 PSMA4P25789 261 aaKnown RBP4.31□□□□□ -1.72
CSTF1-202ENST00000415828 TIMP3P35625 211 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 EIF3BP55884 814 aaKnown RBP4.31□□□□□ -1.72
CSTF1-202ENST00000415828 POLR2LP62875 67 aaKnown RBP4.31□□□□□ -1.72
CSTF1-202ENST00000415828 ALCAMQ13740 583 aa4.31□□□□□ -1.72
CSTF1-202ENST00000415828 FGFBP1Q14512 234 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms