RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SCARB2Q14108 478 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 LCN8Q6JVE9 175 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 LINC00299Q6ZSB3 139 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 OR10Q1Q8NGQ4 319 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 ADAMTS15Q8TE58 950 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 DAZLQ92904 295 aaKnown RBP14.39□□□□□ -0.11
SHMT2-202ENST00000414700 NCLNQ969V3 563 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 TMEM19Q96HH6 336 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 VSTM2LQ96N03 204 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 FOLH1BQ9HBA9 442 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 IFT52Q9Y366 437 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 HS3ST3B1Q9Y662 390 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 MRPS18BQ9Y676 258 aaKnown RBP14.39□□□□□ -0.11
SHMT2-202ENST00000414700 V9GYQ6 96 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 PCSK5Q92824 1860 aa14.39□□□□□ -0.11
SHMT2-202ENST00000414700 TERTO14746 1132 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 PRAMEF2O60811 474 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 GMNNO75496 209 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 CREG1O75629 220 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 IFI6P09912 130 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 RBMS1P29558 406 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 RCVRNP35243 200 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 DLSTP36957 453 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 YAP1P46937 504 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 GPR143P51810 404 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 ADARB1P78563 741 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 EXOSC6Q5RKV6 272 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 GTF2IRD2BQ6EKJ0 949 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 PAPD4Q6PIY7 484 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 CPEB2Q7Z5Q1 589 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 BTLAQ7Z6A9 289 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 GTF2IRD2Q86UP8 949 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 FAM86B1Q8N7N1 296 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 OR4N2Q8NGD1 307 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 OR14A16Q8NHC5 309 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 ITPAQ9BY32 194 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 MAGEL2Q9UJ55 1249 aa14.38□□□□□ -0.11
SHMT2-202ENST00000414700 FARSAQ9Y285 508 aaKnown RBP14.38□□□□□ -0.11
SHMT2-202ENST00000414700 H0YAE9 185 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 MASP2O00187 686 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ABCB7O75027 752 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 PCGF2P35227 344 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 FOLR3P41439 243 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 RAD23AP54725 363 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 SELENBP1Q13228 472 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 CCNJQ5T5M9 372 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ERICH5Q6P6B1 374 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 NPSR1Q6W5P4 371 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 CDRT4Q8N9R6 151 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 APCDD1LQ8NCL9 501 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 NFAM1Q8NET5 270 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 BPIFB6Q8NFQ5 453 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 NKD1Q969G9 470 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ZNF578Q96N58 590 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 SPATA9Q9BWV2 254 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 RSPO3Q9BXY4 272 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 B3GNT4Q9C0J1 378 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 LHPPQ9H008 270 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 SIAEQ9HAT2 523 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 A4GALTQ9NPC4 353 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ZNF223Q9UK11 482 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 KLK13Q9UKR3 277 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 TCRBV5S2A0A599 114 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 GXYLT2A0PJZ3 443 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 SAGE2PA6NJ88 616 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 BRINP1O60477 761 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ZIC2O95409 532 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 OPN1SWP03999 348 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 GPIP06744 558 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 CHRM4P08173 479 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 CT45A8P0DMV1 189 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 CT45A9P0DMV2 189 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 EEF1B2P24534 225 aaKnown RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ARPC4P59998 168 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 FOXC1Q12948 553 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 DNASE1L3Q13609 305 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 VEZF1Q14119 521 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 SF3B4Q15427 424 aaKnown RBP eCLIP14.37□□□□□ -0.113e-8■■■■■ 35.5
SHMT2-202ENST00000414700 CT45A2Q5DJT8 189 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 XAF1Q6GPH4 301 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 KIRREL2Q6UWL6 708 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 DTX1Q86Y01 620 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ADGRG5Q8IZF4 528 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 ZSCAN1Q8NBB4 408 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 HOXB13Q92826 284 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-202ENST00000414700 FAM162AQ96A26 154 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 LMF1Q96S06 567 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 NRSN2Q9GZP1 204 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 GORASP2Q9H8Y8 452 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 FBXO34Q9NWN3 711 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 P2RX2Q9UBL9 471 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 POU2F3Q9UKI9 436 aa14.37□□□□□ -0.11
SHMT2-202ENST00000414700 A8MVJ9 347 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 DYRK3O43781 588 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 SLC28A2O43868 658 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 FCMRO60667 390 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 SERPINA1P01009 418 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms