RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PVRP15151 417 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 GNSP15586 552 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 FASP25445 335 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TMOD1P28289 359 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 FNTAP49354 379 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 MEOX2P50222 304 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 YBEYP58557 167 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 PAX2Q02962 417 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 NME3Q13232 169 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 PPP2R5CQ13362 524 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 TGIF1Q15583 401 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 PRR30Q53SZ7 412 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 MS4A13Q5J8X5 152 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 NEK5Q6P3R8 708 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 FAM159AQ6UWV7 190 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 MIER3Q7Z3K6 550 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 SH2D6Q7Z4S9 175 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 AMZ2Q86W34 360 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF584Q8IVC4 421 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 CD177Q8N6Q3 437 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF397Q8NF99 534 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 FNDC8Q8TC99 324 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 PHYHIPQ92561 330 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 LHX4Q969G2 390 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 RAB3CQ96E17 227 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 SIGLEC12Q96PQ1 595 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 RUFY1Q96T51 708 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 NDUFAF3Q9BU61 184 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 SIRPDQ9H106 197 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 ALG9Q9H6U8 611 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 ESM1Q9NQ30 184 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 NDUFA13Q9P0J0 144 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 VSIG4Q9Y279 399 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 ADCY9O60503 1353 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 LRRC37AA6NMS7 1700 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 UBR3Q6ZT12 1888 aa2.82□□□□□ -1.96
HMGB1P11-201ENST00000413899 IGHV3-35A0A0C4DH35 117 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 LRIT2A6NDA9 550 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 MFSD2BA6NFX1 497 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 CCT8L1PA6NM43 557 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 A8MU10 97 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 NPIPA2E9PIF3 369 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 RANBP6O60518 1105 aaKnown RBP2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 LAMP1P11279 417 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 HMGCLP35914 325 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 STARD6P59095 220 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 CXCL6P80162 114 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZIC1Q15915 447 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 LRIT3Q3SXY7 679 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 AGKQ53H12 422 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 RSBN1Q5VWQ0 802 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 GOLGA7Q7Z5G4 137 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ADGRD2Q7Z7M1 963 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZBED8Q8IZ13 594 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 CCNYQ8ND76 341 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZNF671Q8TAW3 534 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 TFB1MQ8WVM0 346 aaKnown RBP2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 SLC13A3Q8WWT9 602 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 FRAT1Q92837 279 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 CCT8L2Q96SF2 557 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 TSPAN18Q96SJ8 248 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 PAXXQ9BUH6 204 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 SLITRK2Q9H156 845 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 SYTL2Q9HCH5 934 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 TIGARQ9NQ88 270 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ANO10Q9NW15 660 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ABCD2Q9UBJ2 740 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 Q9UF83 564 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 NTNG1Q9Y2I2 539 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 DHRS7Q9Y394 339 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 KIF25-AS1Q9Y6Z4 181 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 IBTKQ9P2D0 1353 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 LAMB1P07942 1786 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 CDK5RAP2Q96SN8 1893 aa2.81□□□□□ -1.96
HMGB1P11-201ENST00000413899 ANKRD31Q8N7Z5 1873 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 RGPD3A6NKT7 1758 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 RGPD4Q7Z3J3 1758 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 LTBP1Q14766 1721 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 DDX60LQ5H9U9 1706 aaKnown RBP2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 A0A0J9YVX5 310 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 SYCE3A1L190 88 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 ARHGAP42A6NI28 874 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 FAM220BPB1ANY3 271 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 KLLNB2CW77 178 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 IGSF6O95976 241 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 MT-ND3P03897 115 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 CT45A10P0DMU9 189 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 PTPN4P29074 926 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 OR1D4P47884 311 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 SLC25A1P53007 311 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 METAP1P53582 386 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 BNIP1Q12981 228 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 GAMTQ14353 236 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 ZKSCAN8Q15776 578 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 CARTPTQ16568 116 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 RNF212Q495C1 297 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 MARC1Q5VT66 337 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 IL23RQ5VWK5 629 aa2.8□□□□□ -1.96
HMGB1P11-201ENST00000413899 LIPKQ5VXJ0 399 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms