RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 OR52E2Q8NGJ4 325 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 C16orf58Q96GQ5 468 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF223Q9UK11 482 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 OR1A2Q9Y585 309 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 SCO2O43819 266 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 SSTR2P30874 369 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 GPR19Q15760 415 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 METTL11BQ5VVY1 283 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 PLBD1Q6P4A8 553 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 HMGN2P46Q86SG4 172 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 PROKR1Q8TCW9 393 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 ANKRD34BA5PLL1 514 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 DRD5P21918 477 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 ZXDBP98169 803 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 ALG10BQ5I7T1 473 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 IER5LQ5T953 404 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 PLAG1Q6DJT9 500 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 FIGNL1Q6PIW4 674 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 OR14A2Q96R54 314 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 HDHD5Q9BXW7 423 aa12.98□□□□□ -0.33
SMARCA4-202ENST00000413806 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 PRSS44E7EML9 344 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 E2F3O00716 465 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 NAT1P18440 290 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CHATP28329 748 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CDK10Q15131 360 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 RPS26P11Q5JNZ5 115 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 TCTE1Q5JU00 501 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CLEC14AQ86T13 490 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 OR9Q2Q8NGE9 314 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 OR5L2Q8NGL0 311 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 OR6Q1Q8NGQ2 317 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 OR13C3Q8NGS6 347 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 SFXN5Q8TD22 340 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 RANGRFQ9HD47 186 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 GMEB2Q9UKD1 530 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 GJD2Q9UKL4 321 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 NOX1Q9Y5S8 564 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 OR6C6A6NF89 314 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 MAOAP21397 527 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 RABIFP47224 123 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 STK11Q15831 433 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 RAB11BQ15907 218 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CDNFQ49AH0 187 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 AGAP7PQ5VUJ5 663 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC18B1Q6NT16 456 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 SPARTQ8N0X7 666 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 MAN2B1O00754 1011 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 DNAJB6O75190 326 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 DLSTP36957 453 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CTSL3PQ5NE16 218 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CDRT4Q8N9R6 151 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 WDR20Q8TBZ3 569 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 C19orf12Q9NSK7 152 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 GLTPQ9NZD2 209 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 CNOT2Q9NZN8 540 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 APOBEC3BQ9UH17 382 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ATXN1LP0C7T5 689 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 JUNDP17535 347 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 PRDX3P30048 256 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 MAGEA3P43357 314 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 PRPS1P60891 318 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 SHC2P98077 582 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ESCO2Q56NI9 601 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF619Q8N2I2 560 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ACVR1CQ8NER5 493 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 C3orf30Q96M34 536 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ZFYVE21Q9BQ24 234 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 POU2F3Q9UKI9 436 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ENTPD2Q9Y5L3 495 aa12.97□□□□□ -0.33
SMARCA4-202ENST00000413806 ANKRD33BA6NCL7 494 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 KRBOX1C9JBD0 128 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 WDPCPO95876 746 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 LSSP48449 732 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 AFF3P51826 1226 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 HSD11B2P80365 405 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 SIM1P81133 766 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.338e-7■■■□□ 15.1
SMARCA4-202ENST00000413806 SYT14Q8NB59 555 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 OR5AR1Q8NGP9 310 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 TGM7Q96PF1 710 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 NAA11Q9BSU3 229 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 HSBP1L1C9JCN9 74 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 EDIL3O43854 480 aa12.96□□□□□ -0.33
SMARCA4-202ENST00000413806 SYNGR4O95473 234 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms