RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 A0A0J9YWU9 116 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 METTL21EPA6NDL7 271 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 CCT8L1PA6NM43 557 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF487B1APH4 448 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 SHISA9B4DS77 424 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 OPN1LWP04000 364 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 SERPINB2P05120 415 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 RPL4P36578 427 aaKnown RBP3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 PTGER3P43115 390 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 GNPDA1P46926 289 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 CSRP3P50461 194 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 PPT1P50897 306 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 BDH1Q02338 343 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC10A1Q14973 349 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 C17orf58Q2M2W7 97 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 VWA2Q5GFL6 755 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 GFI1BQ5VTD9 330 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 OR8G2PQ6IF36 304 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ACSM5Q6NUN0 579 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF679Q8IYX0 411 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC22A18ASQ8N1D0 253 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ANKFN1Q8N957 763 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF599Q96NL3 588 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 PSKH2Q96QS6 385 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 RIT2Q99578 217 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 OMDQ99983 421 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 VGLL1Q99990 258 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 FEM1AQ9BSK4 669 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 PANK3Q9H999 370 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 TIGARQ9NQ88 270 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 ELOVL2Q9NXB9 296 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 CYTH4Q9UIA0 394 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 MAB21L2Q9Y586 359 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 MAD1L1Q9Y6D9 718 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 METP08581 1390 aa3.83□□□□□ -1.8
HMGB3P31-201ENST00000413333 PTCH1Q13635 1447 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 IGHV3OR16-12A0A075B7B8 117 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 E9PQ18 207 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 LCMT2O60294 686 aaKnown RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SNNO75324 88 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 HMMRO75330 724 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SNX4O95219 450 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 OPN1MWP04001 364 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 HBQ1P09105 142 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 ALPIP09923 528 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 OPN1MW2P0DN77 364 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 OPN1MW3P0DN78 364 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 ATP5A1P25705 553 aaKnown RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 PBLDP30039 288 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 ACVR1BP36896 505 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 DHPSP49366 369 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 AIF1P55008 147 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 IL18R1Q13478 541 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 PEX6Q13608 980 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZMYND11Q15326 602 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SYPL1Q16563 259 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 GGTA1PQ4G0N0 100 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 NHLRC3Q5JS37 347 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 CEP85LQ5SZL2 805 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 MEDAGQ5VYS4 303 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SEL1L3Q68CR1 1132 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF343Q6P1L6 599 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 PAQR6Q6TCH4 344 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SYT10Q6XYQ8 523 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC25A42Q86VD7 318 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 UBQLNLQ8IYU4 475 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF683Q8IZ20 524 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 BPIFB2Q8N4F0 458 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 STXBP6Q8NFX7 210 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 PIWIL1Q96J94 861 aaKnown RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC30A2Q9BRI3 323 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 GON7Q9BXV9 100 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 CAPS2Q9BXY5 557 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 TRIM15Q9C019 465 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 AMBNQ9NP70 447 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 RAB18Q9NP72 206 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 C6orf203Q9P0P8 240 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 MDFICQ9P1T7 246 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 GALPQ9UBC7 116 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 NTNG1Q9Y2I2 539 aa3.82□□□□□ -1.8
HMGB3P31-201ENST00000413333 OR6C65A6NJZ3 312 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF208O43345 1280 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 NUDT21O43809 227 aaKnown RBP3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 TPST2O60704 377 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 SURF6O75683 361 aaKnown RBP3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 F10P00742 488 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 IL1BP01584 269 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 MELTFP08582 738 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 RNF224P0DH78 156 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 BCKDHAP12694 445 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 CDH5P33151 784 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 HPCAL1P37235 193 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 PRELPP51888 382 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 ARHGDIBP52566 201 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 PUDPQ08623 228 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 PPP1R3AQ16821 1122 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 FAM182AQ5T1J6 154 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 LGSNQ5TDP6 509 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 TMEM225Q6GV28 225 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms