RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 C6orf15Q6UXA7 325 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 MOB1BQ7L9L4 216 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ZFAND2BQ8WV99 257 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 CRELD1Q96HD1 420 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 FER1L6-AS2Q96M78 137 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SSX3Q99909 188 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 COPS4Q9BT78 406 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ZBTB20Q9HC78 741 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GNG8Q9UK08 70 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF222Q9UK12 451 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SSR3Q9UNL2 185 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 LOXL2Q9Y4K0 774 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 MIA3Q5JRA6 1907 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 UBE2QL1A1L167 161 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SHISA7A6NL88 538 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 TEX46H3BTG2 121 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 TNFRSF10AO00220 468 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 KCNK5O95279 499 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GNAO1P09471 354 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 LIM2P55344 173 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GANABQ14697 944 aaKnown RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 CRB2Q5IJ48 1285 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 FAM69BQ5VUD6 431 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 RNF165Q6ZSG1 346 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 KCTD8Q6ZWB6 473 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 BMP8AQ7Z5Y6 402 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 OR7G1Q8NGA0 311 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 MND1Q9BWT6 205 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SLC6A20Q9NP91 592 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 THSD1Q9NS62 852 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ATG4BQ9Y4P1 393 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SPINT1O43278 529 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SCO2O43819 266 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 TPST2O60704 377 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 TRAPPC6AO75865 159 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SP9P0CG40 484 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 MECP2P51608 486 aaKnown RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GPR143P51810 404 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 HBA1P69905 142 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 UGT8Q16880 541 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GTDC1Q4AE62 458 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GUSBP11Q6P575 273 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 FAM220AQ7Z4H9 259 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 EPHX4Q8IUS5 362 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 OR52R1Q8NGF1 315 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 GRHL3Q8TE85 626 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 SMPDL3BQ92485 455 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 DIO2Q92813 273 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 BTBD2Q9BX70 525 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 ASPNQ9BXN1 380 aa7.99□□□□□ -1.13
SYNE1-211ENST00000413186 RBMX2Q9Y388 322 aaKnown RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 MAP1BP46821 2468 aaKnown RBP7.99□□□□□ -1.13
SYNE1-211ENST00000413186 FRMPD3Q5JV73 1810 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 FAM25EA8MYX2 175 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SLC22A1O15245 554 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 LCMT2O60294 686 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ABCB7O75027 752 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PABPC4LP0CB38 370 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 CPOXP36551 454 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SLC6A8P48029 635 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 MAT1AQ00266 395 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 IL11RAQ14626 422 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 CNPY1Q3B7I2 92 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SHISA6Q6ZSJ9 500 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 P2RY8Q86VZ1 359 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PLCZ1Q86YW0 608 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 OR4D9Q8NGE8 314 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SH3YL1Q96HL8 342 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SLC46A1Q96NT5 459 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 FCRL4Q96PJ5 515 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ALPK1Q96QP1 1244 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 NEK6Q9HC98 313 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 MKLN1Q9UL63 735 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 MGAT4BQ9UQ53 548 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF99A8MXY4 864 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ALOX12BO75342 701 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 RHCEP18577 417 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 TCN2P20062 427 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ELAVL1Q15717 326 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 KLHL22Q53GT1 634 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 COLEC12Q5KU26 742 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PAPD4Q6PIY7 484 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF773Q6PK81 442 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SLITRK2Q9H156 845 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SOX17Q9H6I2 414 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 FANCFQ9NPI8 374 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 UCKL1Q9NWZ5 548 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 MAN2B2Q9Y2E5 1009 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 KCNIP3Q9Y2W7 256 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 RPL36Q9Y3U8 105 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 LOC100130705A0A1B0GUX0 176 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 TCRBV3S1A0A5B6 114 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ACOT7O00154 380 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PCDH17O14917 1159 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 MRPS14O60783 128 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PDGFBP01127 241 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 RELAQ04206 551 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 C18orf63Q68DL7 685 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms