RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 TIMM29Q9BSF4 260 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 RSPH9Q9H1X1 276 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 ATP13A2Q9NQ11 1180 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 HINT3Q9NQE9 182 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 LIPT1Q9Y234 373 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 TRAPPC4Q9Y296 219 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 CACNA1CQ13936 2221 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 CDC42EP2O14613 210 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 SLC2A2P11168 524 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 NT5EP21589 574 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 GPR50Q13585 617 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 AGERQ15109 404 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 DUSP5Q16690 384 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 ZNF776Q68DI1 518 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 ZNF57Q68EA5 555 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 LRRC25Q8N386 305 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 KLHL36Q8N4N3 616 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 OSTF1Q92882 214 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 CES1P1Q9UKY3 287 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 SAGP10523 405 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 BMP7P18075 431 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 RACK1P63244 317 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 ABATP80404 500 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 ZC3H14Q6PJT7 736 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 ASPGQ86U10 573 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 Q8N402 240 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 CLDN22Q8N7P3 220 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 OR2T33Q8NG76 320 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 OR10H4Q8NGA5 316 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 SMAP2Q8WU79 429 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 GFM1Q96RP9 751 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 MOV10Q9HCE1 1003 aaKnown RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 RANGRFQ9HD47 186 aaPredicted RBP12.91□□□□□ -0.34
NUB1-201ENST00000413040 ITGB1BP2Q9UKP3 347 aa12.91□□□□□ -0.34
NUB1-201ENST00000413040 TMEM129A0AVI4 362 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 DUXAA6NLW8 204 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 C12orf71A8MTZ7 269 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 HRO43593 1189 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 ADH1BP00325 375 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 IFI30P13284 250 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PVRP15151 417 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 NDUFV2P19404 249 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 MYL9P24844 172 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 MN1Q10571 1320 aaPredicted RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 TPBGQ13641 420 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 QPRTQ15274 297 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PGGHGQ32M88 737 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 XKRXQ6PP77 449 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PAMR1Q6UXH9 720 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 VN1R4Q7Z5H5 301 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 OR4K14Q8NGD5 310 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 OR51A7Q8NH64 312 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 ZNF681Q96N22 645 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 CLEC4AQ9UMR7 237 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 NDRG2Q9UN36 371 aaKnown RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 IRGMA1A4Y4 181 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 GABRPO00591 440 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 AKAP8O43823 692 aaKnown RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 GABRA5P31644 462 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PPM1FP49593 454 aaPredicted RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 GAS1P54826 345 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PPP2CBP62714 309 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PPP2CAP67775 309 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 BNC1Q01954 994 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 DSG2Q14126 1118 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 IDNKQ5T6J7 187 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 CDC73Q6P1J9 531 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 CXXC5Q7LFL8 322 aaKnown RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 MFSD9Q8NBP5 474 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 MOAP1Q96BY2 351 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 OR2M4Q96R27 311 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 ISG20L2Q9H9L3 353 aaKnown RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 FBXO34Q9NWN3 711 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 PAQR5Q9NXK6 330 aaPredicted RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 NLKQ9UBE8 527 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 ZNF443Q9Y2A4 671 aaPredicted RBP12.9□□□□□ -0.34
NUB1-201ENST00000413040 GRIP1Q9Y3R0 1128 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
NUB1-201ENST00000413040 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 SYT5O00445 386 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 GNB5O14775 395 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 THY1P04216 161 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 HLA-DPB1P04440 258 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 LAMP2P13473 410 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 ERVK-21P61565 698 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 PRRT3Q5FWE3 981 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 ARL9Q6T311 187 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 FRRS1Q6ZNA5 592 aa12.89□□□□□ -0.35
NUB1-201ENST00000413040 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms