RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 C9orf43Q8TAL5 461 aaPredicted RBP16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 GNPDA2Q8TDQ7 276 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 HLA-CQ95604 372 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 CTHRC1Q96CG8 243 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 TCTN2Q96GX1 697 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 SLC41A3Q96GZ6 507 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 HSPA12BQ96MM6 686 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 ANKRD19PQ9H560 264 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 LILRA5A6NI73 299 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 EFCAB9A8MZ26 197 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 SDC3O75056 442 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 THBS1P07996 1170 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 SLC35E2P0CK97 266 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 PIPP12273 146 aaPredicted RBP16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 IL9P15248 144 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 MLLT1Q03111 559 aaPredicted RBP16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 ZNF155Q12901 538 aaPredicted RBP16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 DNASE1L3Q13609 305 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 ACSM5Q6NUN0 579 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 VWA5B2Q8N398 1253 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 CRELD1Q96HD1 420 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 DSN1Q9H410 356 aa16.32■□□□□ 0.2
CROCCP2-202ENST00000412962 CLDN25C9JDP6 229 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 PEX12O00623 359 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 TLX2O43763 284 aaPredicted RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 SRPX2O60687 465 aaPredicted RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 CDC123O75794 336 aaPredicted RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 CBX7O95931 251 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 HSMCR30P0CW71 290 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 GABRA3P34903 492 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 SERPINB10P48595 397 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 CLK1P49759 484 aaKnown RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 SLC13A2Q13183 592 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 SOWAHCQ53LP3 525 aaPredicted RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 ARMCX4Q5H9R4 360 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 ZCCHC12Q6PEW1 402 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 C11orf74Q86VG3 221 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 OR52R1Q8NGF1 315 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 WDR36Q8NI36 951 aaKnown RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 PIGXQ8TBF5 258 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 PEX11GQ96HA9 241 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 POLDIP3Q9BY77 421 aaKnown RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 UCK1Q9HA47 277 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 SPAG17Q6Q759 2223 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 FOXS1O43638 330 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 AIREO43918 545 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 KIAA0513O60268 411 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 OR5F1O95221 314 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 RPS4Y1P22090 263 aaKnown RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 GADD45AP24522 165 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 OMPP47874 163 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 GFERP55789 205 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 TPTEP56180 551 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 MAT1AQ00266 395 aaKnown RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 CDK5Q00535 292 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 ZNF91Q05481 1191 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 TSPAN31Q12999 210 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 ZNF367Q7RTV3 350 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 SLC46A3Q7Z3Q1 461 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 TEX47Q8TBZ9 253 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 ACOT11Q8WXI4 607 aaPredicted RBP16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 ZHX1-C8orf76Q96EF9 292 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 TGM7Q96PF1 710 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 OR5M11Q96RB7 305 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 CHRDQ9H2X0 955 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 HMG20AQ9NP66 347 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 PALMDQ9NP74 551 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 KCNE5Q9UJ90 142 aa16.31■□□□□ 0.2
CROCCP2-202ENST00000412962 DBIP07108 87 aaKnown RBP16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 RNH1P13489 461 aaKnown RBP16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 IDUAP35475 653 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 MAP3K8P41279 467 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 ZNF136P52737 540 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 SMSP52788 366 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 STARD6P59095 220 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 MAP4K2Q12851 820 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 MED22Q15528 200 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 DECR1Q16698 335 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 MRPL2Q5T653 305 aaKnown RBP16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 IQCF2Q8IXL9 164 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 DYNC2LI1Q8TCX1 351 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 TSSK6Q9BXA6 273 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 SAP130Q9H0E3 1048 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 PCED1AQ9H1Q7 454 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 TGFBR3LH3BV60 316 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 DBTP11182 482 aaKnown RBP16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 PTNP21246 168 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 MLLT3P42568 568 aaPredicted RBP16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 POU6F2P78424 691 aaPredicted RBP16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 ZNF846Q147U1 533 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 OCLNQ16625 522 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 NRMQ8IXM6 262 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 OR8D4Q8NGM9 314 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 TMEM255BQ8WV15 326 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 CAPSLQ8WWF8 208 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 RNF167Q9H6Y7 350 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 SOHLH2Q9NX45 425 aa16.3■□□□□ 0.2
CROCCP2-202ENST00000412962 SLC7A7Q9UM01 511 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms