RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RYDENQ9NUL5 291 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 LRP2BPQ9P2M1 347 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SLC17A6Q9P2U8 582 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CDH10Q9Y6N8 788 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 C7orf66A4D0T2 115 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 RGS10O43665 173 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 GMFGO60234 142 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 B3GAT3O94766 335 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 CLDN9O95484 217 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 MT-ND2P03891 347 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 RPLP1P05386 114 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 IL11P20809 199 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 SHC1P29353 583 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ARL4AP40617 200 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 MAGEA2P43356 314 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 SLC37A1P57057 533 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ERVS71-1P61550 626 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 GPM6BQ13491 265 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 PWP1Q13610 501 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 MBTPS1Q14703 1052 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 PEA15Q15121 130 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TRIP4Q15650 581 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 NKAIN1Q4KMZ8 207 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ARL13AQ5H913 290 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 SPANXN3Q5MJ09 141 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 EOGTQ5NDL2 527 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TMEM164Q5U3C3 297 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 LAIR1Q6GTX8 287 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 KIAA1211LQ6NV74 962 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 MPZL3Q6UWV2 235 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 LBX2Q6XYB7 198 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 GDPGP1Q6ZNW5 385 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ZCCHC10Q8TBK6 192 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 NSUN4Q96CB9 384 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 RRNAD1Q96FB5 475 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 WFIKKN1Q96NZ8 548 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ZNF426Q9BUY5 554 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 PRR14Q9BWN1 585 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 NMRAL1Q9HBL8 299 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 MS4A12Q9NXJ0 267 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 NLKQ9UBE8 527 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ZNF282Q9UDV7 671 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 DKKL1Q9UK85 242 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 A0A0U1RQK1 487 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 A0A1W2PQ45 241 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 A0A1W2PQY0 241 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ZNF320A2RRD8 509 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 GABRR3A8MPY1 467 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 M0R143 59 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TPST1O60507 370 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 CXCL2P19875 107 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 HRH2P25021 359 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 NAA10P41227 235 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 VSX2P58304 361 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 TLE4Q04727 773 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 MAP4K2Q12851 820 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 LCP2Q13094 533 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 CDH18Q13634 790 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ADIPOQQ15848 244 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TSTQ16762 297 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 PYCR3Q53H96 274 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 SFRP5Q5T4F7 317 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TMEM198Q66K66 360 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 NCR3LG1Q68D85 454 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 BICRALQ6AI39 1079 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ZNF470Q6ECI4 717 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 LARP4Q71RC2 724 aaKnown RBP eCLIP4.91□□□□□ -1.625e-6■■■■□ 23.2
HERC4-205ENST00000412272 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 FOXRED2Q8IWF2 684 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 LAX1Q8IWV1 398 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 FAM98AQ8NCA5 519 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 OR52N4Q8NGI2 321 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 OR5M9Q8NGP3 310 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 OR2G2Q8NGZ5 317 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 OR5R1Q8NH85 324 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 PAQR8Q8TEZ7 354 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 FBXO32Q969P5 355 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ARSGQ96EG1 525 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 NRIP3Q9NQ35 241 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 SCN3BQ9NY72 215 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TMEFF2Q9UIK5 374 aaPredicted RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 PCDHB14Q9Y5E9 798 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 TMEM218A2RU14 115 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 OR14I1A6ND48 311 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 A6NIZ1 184 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 CYR61O00622 381 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ANKRD28O15084 1053 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 RAD17O75943 681 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 YIF1AO95070 293 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 VNN2O95498 520 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 FADS2O95864 444 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 SRPRAP08240 638 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 EPXP11678 715 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 APEX1P27695 318 aaKnown RBP4.91□□□□□ -1.62
HERC4-205ENST00000412272 ARR3P36575 388 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 ALDH3B1P43353 468 aa4.91□□□□□ -1.62
HERC4-205ENST00000412272 SRP9P49458 86 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms