RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GALNT18Q6P9A2 607 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MAPK1IP1LQ8NDC0 245 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF382Q96SR6 550 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FUT8Q9BYC5 575 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SHCBP1LQ9BZQ2 653 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FANCFQ9NPI8 374 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 DDX18Q9NVP1 670 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 LAMP3Q9UQV4 416 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 VDAC3Q9Y277 283 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TIMM22Q9Y584 194 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PRR14LQ5THK1 2151 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FBN1P35555 2871 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SS18L1O75177 396 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SLITRK5O94991 958 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 UTS2O95399 124 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OPN1LWP04000 364 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GSTM5P46439 218 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CLEC12BQ2HXU8 276 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMEM44Q2T9K0 475 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CTU2Q2VPK5 515 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SPDYAQ5MJ70 313 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C8orf74Q6P047 294 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 APOOLQ6UXV4 268 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 BEND4Q6ZU67 534 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RELL1Q8IUW5 271 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OR10D3Q8NH80 312 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 DCAKDQ8WVC6 231 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 AKAP1Q92667 903 aaKnown RBP eCLIP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C11orf24Q96F05 449 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMEM237Q96Q45 408 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMEM204Q9BSN7 226 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ACTR6Q9GZN1 396 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CDC42EP4Q9H3Q1 356 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GLIPR2Q9H4G4 154 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MIEF1Q9NQG6 463 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MCTS1Q9ULC4 181 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GRID1Q9ULK0 1009 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 COL6A5A8TX70 2615 aa12.75□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IGLV3-32A0A0A0MS00 114 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GXYLT2A0PJZ3 443 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CXCL13O43927 109 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 DLX3O60479 287 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SOX30O94993 753 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PSMG1O95456 288 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SYNGR4O95473 234 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IMPDH1P20839 514 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GABRA3P34903 492 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RPS4XP62701 263 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PRR5P85299 388 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF763Q0D2J5 394 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 VEZF1Q14119 521 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GRAMD1BQ3KR37 738 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 STK32CQ86UX6 486 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 WDR75Q8IWA0 830 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SLC9A6Q92581 669 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ELP4Q96EB1 424 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 LMF2Q9BU23 707 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C12orf49Q9H741 205 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C3orf14Q9HBI5 128 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GLRX2Q9NS18 164 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SIRT5Q9NXA8 310 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PAQR5Q9NXK6 330 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TAS2R7Q9NYW3 318 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMEM216Q9P0N5 145 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF180Q9UJW8 692 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GPR52Q9Y2T5 361 aa12.74□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CCDC151A5D8V7 595 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 KCNH1O95259 989 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ENO1P06733 434 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SNRPAP09012 282 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF17P17021 662 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 NTSP30990 170 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 DMTNQ08495 405 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FAM71E1Q6IPT2 247 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MFSD12Q6NUT3 480 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GALNT10Q86SR1 603 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TRMT61AQ96FX7 289 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ADGRG7Q96K78 797 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 AMDHD1Q96NU7 426 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 NPAS1Q99742 590 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OR10A4Q9H209 315 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 STK38LQ9Y2H1 464 aa12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ANK3Q12955 4377 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CR1P17927 2039 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 A0A087WZY1 265 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SERTM1A2A2V5 107 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TNFSF11O14788 317 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ADAMDEC1O15204 470 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 NDUFB5O43674 189 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TP53P04637 393 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PSMB1P20618 241 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms