RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 IGSF6O95976 241 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TRBC1P01850 177 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 PLEKP08567 350 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 PRR23D2P0DMB1 279 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 ACADSP16219 412 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 HNRNPH3P31942 346 aaKnown RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 ZFP36L2P47974 494 aaKnown RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 DAOAP59103 153 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 PLP1P60201 277 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TUBA1BP68363 451 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 CRMP1Q14194 572 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 SLC17A1Q14916 467 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TGFBIQ15582 683 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 SRSF7Q16629 238 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM5-205ENST00000409952 SGSM1Q2NKQ1 1148 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 ACCSLQ4AC99 568 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 MTX3Q5HYI7 312 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 OTUD3Q5T2D3 398 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 ATRAIDQ6UW56 229 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 BTNL3Q6UXE8 466 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 ZNF852Q6ZMS4 543 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 MRPL10Q7Z7H8 261 aaKnown RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 SCD5Q86SK9 330 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 LINC00523Q86TU6 105 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 CCDC50Q8IVM0 306 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 OR4N5Q8IXE1 308 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 MARVELD2Q8N4S9 558 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 OR2L3Q8NG85 312 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 OR4D10Q8NGI6 311 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 SLCO2A1Q92959 643 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TMEM143Q96AN5 459 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 NKX3-1Q99801 234 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 SLC6A7Q99884 636 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 DPH7Q9BTV6 452 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 C20orf24Q9BUV8 137 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TRIM62Q9BVG3 475 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 ST6GALNAC5Q9BVH7 336 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 PINK1Q9BXM7 581 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 ANKRD60Q9BZ19 345 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 GAREM1Q9H706 876 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 MTHFD2LQ9H903 347 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 SLC17A5Q9NRA2 495 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 TEX10Q9NXF1 929 aaPredicted RBP4.25□□□□□ -1.73
LSM5-205ENST00000409952 SLC7A8Q9UHI5 535 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 PITPNC1Q9UKF7 332 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 IKZF2Q9UKS7 526 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM5-205ENST00000409952 PPP2R2CQ9Y2T4 447 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 DHRS7Q9Y394 339 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 N6AMT1Q9Y5N5 214 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 GMEB1Q9Y692 573 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 INSRP06213 1382 aa4.25□□□□□ -1.73
LSM5-205ENST00000409952 MAP3K19Q56UN5 1328 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 IGHV4OR15-8A0A075B7B6 117 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 NPIPA5A0A0B4J1W7 369 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 IGHV4-61A0A0C4DH41 118 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 NPIPA5E9PKD4 350 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 PDLIM1O00151 329 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 MSH4O15457 936 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 CHMP2AO43633 222 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 EFNA2O43921 213 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 PRKNO60260 465 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 KRT36O76013 467 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 OR2F2O95006 317 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 IGHV4-59P01825 116 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 GPIP06744 558 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 CCNB1P14635 433 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 XRCC1P18887 633 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 TUBG1P23258 451 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 BRCC3P46736 316 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 GYG1P46976 350 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 DUSP3P51452 185 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 NOVA1P51513 510 aaKnown RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 YWHAGP61981 247 aaKnown RBP eCLIP4.24□□□□□ -1.73
LSM5-205ENST00000409952 RAB11AP62491 216 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SNTA1Q13424 505 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 PEX6Q13608 980 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 CUL1Q13616 776 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 GK3PQ14409 553 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 P2RY6Q15077 328 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 UBE2V2Q15819 145 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 RAB11BQ15907 218 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 HNRNPA1L2Q32P51 320 aaKnown RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 CYBRD1Q53TN4 286 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 BEND3Q5T5X7 828 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SLX4IPQ5VYV7 408 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 ACSM5Q6NUN0 579 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SCYL2Q6P3W7 929 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 UQCC3Q6UW78 93 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 PIM3Q86V86 326 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SERPINA9Q86WD7 417 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 SLC22A15Q8IZD6 547 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 ZNF843Q8N446 348 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 TRIML2Q8N7C3 387 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 CHDHQ8NE62 594 aaPredicted RBP4.24□□□□□ -1.73
LSM5-205ENST00000409952 OR7G2Q8NG99 324 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 OR10A7Q8NGE5 316 aa4.24□□□□□ -1.73
LSM5-205ENST00000409952 OR6F1Q8NGZ6 308 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms