RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CCDC167Q9P0B6 97 aa9.95□□□□□ -0.82
CHMP3-205ENST00000409810 ERRFI1Q9UJM3 462 aaPredicted RBP9.95□□□□□ -0.82
CHMP3-205ENST00000409810 TINAGQ9UJW2 476 aa9.95□□□□□ -0.82
CHMP3-205ENST00000409810 NCOA6Q14686 2063 aaPredicted RBP9.95□□□□□ -0.82
CHMP3-205ENST00000409810 LRRK2Q5S007 2527 aa9.95□□□□□ -0.82
CHMP3-205ENST00000409810 FLNCQ14315 2725 aa9.95□□□□□ -0.82
CHMP3-205ENST00000409810 C15orf38-AP3S2A0A0A6YYH1 394 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 A0A1W2PQD3 144 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 C2orf72A6NCS6 295 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 ALG1L2C9J202 215 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 NPIPA2E9PIF3 369 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 NPIPA3F8WFD2 350 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 H3BNH8 94 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 NDUFB5O43674 189 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 STX11O75558 287 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 WISP2O76076 250 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 OXSR1O95747 527 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 ANGPTL1O95841 491 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 CELA3AP09093 270 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 ENDOUP21128 410 aaKnown RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 DCTP40126 519 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 MAGEA8P43361 318 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 TRPC1P48995 793 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 ARFIP2P53365 341 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 GAS1P54826 345 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 DSCR4P56555 118 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 RPS26P62854 115 aaKnown RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 STX5Q13190 355 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 FLYWCH1Q4VC44 716 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 C6orf10Q5SRN2 563 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 METTL21CQ5VZV1 264 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 TNFAIP8L2Q6P589 184 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 RPTNQ6XPR3 784 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 DNAJC14Q6Y2X3 702 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 CHERPQ8IWX8 916 aaKnown RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 CLEC4FQ8N1N0 589 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 WDSUB1Q8N9V3 476 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 CHDHQ8NE62 594 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 FAM83FQ8NEG4 500 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 OR14L1PQ8NHC6 308 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 RFWD2Q8NHY2 731 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 SPDL1Q96EA4 605 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 INPP5KQ9BT40 448 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 TMEM120AQ9BXJ8 343 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 OR2B2Q9GZK3 357 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 SLC6A15Q9H2J7 730 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 RAD21L1Q9H4I0 556 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 POLE3Q9NRF9 147 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 FLRT3Q9NZU0 649 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 ACAD8Q9UKU7 415 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-205ENST00000409810 ICE1Q9Y2F5 2266 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 MED12Q93074 2177 aa9.94□□□□□ -0.82
CHMP3-205ENST00000409810 FAM47E-STBD1D6RA91 191 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 E9PLN8 166 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 NR5A2O00482 541 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 WDR1O75083 606 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 LDLRP01130 860 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 ZCCHC18P0CG32 403 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 OR12D1P0DN82 309 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 GABRA1P14867 456 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 DPP4P27487 766 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 PTGER4P35408 488 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 CDKN2CP42773 168 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 ZFP36L2P47974 494 aaKnown RBP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 ATP12AP54707 1039 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 SRSF1Q07955 248 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 SF3B4Q15427 424 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF630Q2M218 657 aaPredicted RBP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 ARHGAP11BQ3KRB8 267 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 AGKQ53H12 422 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 TMEM211Q6ICI0 200 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 OR5M10Q6IEU7 315 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 AAGABQ6PD74 315 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 FGD2Q7Z6J4 655 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 MTERF4Q7Z6M4 381 aaKnown RBP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 GALNT10Q86SR1 603 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 MARCH3Q86UD3 253 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 IFNEQ86WN2 208 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 RNF130Q86XS8 419 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 DOLPP1Q86YN1 238 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 PM20D2Q8IYS1 436 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 FADS6Q8N9I5 356 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 PHF10Q8WUB8 498 aaKnown RBP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 XAGE5Q8WWM1 108 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 OIT3Q8WWZ8 545 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 VPS33AQ96AX1 596 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 SDF2Q99470 211 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 VKORC1Q9BQB6 163 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 ZNF350Q9GZX5 532 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 SERHL2Q9H4I8 314 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 THUMPD1Q9NXG2 353 aaKnown RBP9.93□□□□□ -0.82
CHMP3-205ENST00000409810 SPRR3Q9UBC9 169 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 FBXL2Q9UKC9 423 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 MEMO1Q9Y316 297 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 HEATR5AQ86XA9 2040 aa9.93□□□□□ -0.82
CHMP3-205ENST00000409810 CACNA1CQ13936 2221 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms