RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SAR1AQ9NR31 198 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 SLAMF8Q9P0V8 285 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 B4GALT7Q9UBV7 327 aa20.39■□□□□ 0.85
PTCD3-203ENST00000409783 A0A1W2PP18 115 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 HPNP05981 417 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 ENDOUP21128 410 aaKnown RBP20.38■□□□□ 0.85
PTCD3-203ENST00000409783 GDF1P27539 372 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 KHKP50053 298 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 OR5M10Q6IEU7 315 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 OLIG3Q7RTU3 272 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 SPPL2CQ8IUH8 684 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 FADS6Q8N9I5 356 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 PNPT1Q8TCS8 783 aaKnown RBP20.38■□□□□ 0.85
PTCD3-203ENST00000409783 XAGE5Q8WWM1 108 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 TPT1P8Q9HAU6 139 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 UBQLN4Q9NRR5 601 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 SLC25A37Q9NYZ2 338 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 FBXL2Q9UKC9 423 aa20.38■□□□□ 0.85
PTCD3-203ENST00000409783 TRBV5-3A0A0A0MS03 114 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 NPIPA5A0A0B4J1W7 369 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 NPIPA7E9PJI5 369 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 SUSD5O60279 629 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 SLC19A2O60779 497 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 CBR3O75828 277 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 ANP32DO95626 131 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 KRT75O95678 551 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 AK1P00568 194 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 NPIPA8P0DM63 369 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 DRD4P21917 467 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 RBPJQ06330 500 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 ARHGAP11AQ6P4F7 1023 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 TSPEARQ8WU66 669 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 TBL1XR1Q9BZK7 514 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 ZNF350Q9GZX5 532 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 SLC6A15Q9H2J7 730 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 EXD2Q9NVH0 621 aa20.37■□□□□ 0.85
PTCD3-203ENST00000409783 IGLV3-32A0A0A0MS00 114 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 A0A1W2PQD3 144 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 FCMRO60667 390 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 HCN1O60741 890 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 ANGPTL1O95841 491 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 AGR2O95994 175 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 GUSBP08236 651 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 MAGEA8P43361 318 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 TXNL4AP83876 142 aaKnown RBP20.36■□□□□ 0.85
PTCD3-203ENST00000409783 UBAP2LQ14157 1087 aaKnown RBP20.36■□□□□ 0.85
PTCD3-203ENST00000409783 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTCD3-203ENST00000409783 RETREG3Q86VR2 466 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 OR2M3Q8NG83 312 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 DUSP19Q8WTR2 217 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 PPP4R1LQ9P1A2 415 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 SPRR3Q9UBC9 169 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 KCNE5Q9UJ90 142 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 GMEB1Q9Y692 573 aa20.36■□□□□ 0.85
PTCD3-203ENST00000409783 USP9XQ93008 2570 aaPredicted RBP20.36■□□□□ 0.85
PTCD3-203ENST00000409783 MED12Q93074 2177 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 TRGV5A0A0B4J1U4 118 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 AQP7O14520 342 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 SEMA7AO75326 666 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 STX11O75558 287 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 ATP6V1C1P21283 382 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 PTGS2P35354 604 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 DCTP40126 519 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 CLK3P49761 638 aaKnown RBP20.35■□□□□ 0.85
PTCD3-203ENST00000409783 ATP12AP54707 1039 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 KLF10Q13118 480 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 STX5Q13190 355 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 MAPK11Q15759 364 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 C3AR1Q16581 482 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.35■□□□□ 0.85
PTCD3-203ENST00000409783 FLYWCH1Q4VC44 716 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 KLHL26Q53HC5 615 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 EIPR1Q53HC9 387 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 DLEU7Q6UYE1 221 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 DPP10Q8N608 796 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 FAM83FQ8NEG4 500 aaPredicted RBP20.35■□□□□ 0.85
PTCD3-203ENST00000409783 NEIL3Q8TAT5 605 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 ROPN1LQ96C74 230 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 OR2B2Q9GZK3 357 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 NMUR2Q9GZQ4 415 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 HOXD1Q9GZZ0 328 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 SAP130Q9H0E3 1048 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 DSN1Q9H410 356 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 SDHAF3Q9NRP4 125 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 VAPAQ9P0L0 249 aa20.35■□□□□ 0.85
PTCD3-203ENST00000409783 CENPVL1A0A0U1RR11 272 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 GMNCA6NCL1 334 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 TRAPPC6AO75865 159 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 SNRPB2P08579 225 aaKnown RBP20.34■□□□□ 0.85
PTCD3-203ENST00000409783 CA7P43166 264 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 GNGT1P63211 74 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 C17orf67Q0P5P2 114 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 CD226Q15762 336 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 EMC4Q5J8M3 183 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 ATAD3BQ5T9A4 648 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 C1QL3Q5VWW1 255 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 TYW3Q6IPR3 259 aaKnown RBP20.34■□□□□ 0.85
PTCD3-203ENST00000409783 C16orf62Q7Z3J2 963 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 SPATA21Q7Z572 469 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 ANKFN1Q8N957 763 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms