RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ASCL5Q7RTU5 278 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 TAGAPQ8N103 731 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 WDR36Q8NI36 951 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 PHF10Q8WUB8 498 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 CYGBQ8WWM9 190 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 RBM4BQ9BQ04 359 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 ZPBPQ9BS86 351 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 RBM4Q9BWF3 364 aaKnown RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 OSBPL10Q9BXB5 764 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 NMNAT1Q9HAN9 279 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 FLRT3Q9NZU0 649 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 KIF17Q9P2E2 1029 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 C19orf25Q9UFG5 118 aaPredicted RBP11.51□□□□□ -0.57
CHMP3-204ENST00000409727 LRCH1Q9Y2L9 728 aa11.51□□□□□ -0.57
CHMP3-204ENST00000409727 FRG2CA6NGY1 282 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 CPSF4LA6NMK7 179 aaKnown RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 EIF4E1BA6NMX2 242 aaKnown RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 SYT5O00445 386 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 PCDH17O14917 1159 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 TNFSF15O95150 251 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 THBS1P07996 1170 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 NID1P14543 1247 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 DRD5P21918 477 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 RPS4Y1P22090 263 aaKnown RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 FOLR3P41439 243 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 GPR143P51810 404 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 PPP2R2BQ00005 443 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 EIF3IQ13347 325 aaKnown RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 GK3PQ14409 553 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 DESI1Q6ICB0 168 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 TMEM205Q6UW68 189 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 ZNF605Q86T29 641 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 APCDD1LQ8NCL9 501 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 NFAM1Q8NET5 270 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 OR4C3Q8NH37 302 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 CT55Q8WUE5 264 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 ADOQ96SZ5 270 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 ARHGDIGQ99819 225 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 WDR77Q9BQA1 342 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 FNDC11Q9BVV2 318 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 C8orf4Q9NR00 106 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 POLE3Q9NRF9 147 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 ACER3Q9NUN7 267 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 ZNF223Q9UK11 482 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-204ENST00000409727 RAB26Q9ULW5 256 aa11.5□□□□□ -0.57
CHMP3-204ENST00000409727 TRBV4-1A0A0J9YWV2 114 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 TRBV11-1A0A0K0K1C0 115 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 SYNDIG1LA6NDD5 238 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 TTC36A6NLP5 189 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 H0YJX3 145 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 MITFO75030 526 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-204ENST00000409727 REM1O75628 298 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 CLIC3O95833 236 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 DLGAP3O95886 979 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 TAS2R41P59536 307 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 RNF4P78317 190 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 MED21Q13503 144 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 EIPR1Q53HC9 387 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 NHSL2Q5HYW2 709 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 COLEC12Q5KU26 742 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 HSDL2Q6YN16 418 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 GATSQ8NAP1 163 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 OR4C15Q8NGM1 316 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 OR2Y1Q8NGV0 311 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 ALPK1Q96QP1 1244 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 ADI1Q9BV57 179 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 OSBPL11Q9BXB4 747 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 Q9H521 79 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 A4GNTQ9UNA3 340 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 CDHR4A6H8M9 788 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 OR6C76A6NM76 312 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 DPM1O60762 260 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 CYP7B1O75881 506 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 H1F0P07305 194 aaKnown RBP11.49□□□□□ -0.57
CHMP3-204ENST00000409727 THRBP10828 461 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 PRG2P13727 222 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 POU2F1P14859 743 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 IL12BP29460 328 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 DAPP51397 102 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 PLCXD2Q0VAA5 305 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 MERTKQ12866 999 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 NDUFAF6Q330K2 333 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 ENTPD8Q5MY95 495 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 OR10G2Q8NGC3 310 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 GIPC3Q8TF64 312 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 PRRC1Q96M27 445 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 MCHR1Q99705 422 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 TOR3AQ9H497 397 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 PCDHGB5Q9Y5G0 923 aa11.49□□□□□ -0.57
CHMP3-204ENST00000409727 ZFHX2Q9C0A1 2572 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-204ENST00000409727 WWP2O00308 870 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 AP3D1O14617 1153 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 CCNB2O95067 398 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 NTN1O95631 604 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 HPRP00739 348 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms