RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CDS1Q92903 461 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 PKP2Q99959 881 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 C16orf70Q9BSU1 422 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SLC25A18Q9H1K4 315 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SACM1LQ9NTJ5 587 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 A3GALT2U3KPV4 340 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 FMN2Q9NZ56 1722 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 A6NHS1 94 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 UBL4AP11441 157 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 HTR5AP47898 357 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 PITPNBP48739 271 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 MBTPS1Q14703 1052 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 NHSL2Q5HYW2 709 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 VASNQ6EMK4 673 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 WFDC8Q8IUA0 241 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 HHIPL1Q96JK4 782 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF559Q9BR84 538 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 FUCA2Q9BTY2 467 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 NTMT1Q9BV86 223 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 CNIH4Q9P003 139 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 GOSR2O14653 212 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 RPS18P62269 152 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ADARB1P78563 741 aaKnown RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 KCNAB1Q14722 419 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 MSS51Q4VC12 460 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 PIP5KL1Q5T9C9 394 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 FAM57BQ71RH2 274 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 AMIGO3Q86WK7 504 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 OR52E1Q8NGJ3 308 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TAAR8Q969N4 342 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SLAMF9Q96A28 289 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 INPP5KQ9BT40 448 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM59Q9BXS4 323 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SEZ6LQ9BYH1 1024 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 F5H0A9 414 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 M0R3H8 397 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 CTSAP10619 480 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 RNF4P78317 190 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 DUSP2Q05923 314 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 BCL2A1Q16548 175 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF630Q2M218 657 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SLC22A25Q6T423 547 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 ESX1Q8N693 406 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 RLIMQ9NVW2 624 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 MGAT4CQ9UBM8 478 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 SLC23A2Q9UGH3 650 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 BOKQ9UMX3 212 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-203ENST00000409672 Q9Y3F1 56 aa7.95□□□□□ -1.14
SCN9A-203ENST00000409672 IGHV3-20A0A0C4DH32 117 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 AGPAT2O15120 278 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 DFNA5O60443 496 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TP53P04637 393 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 NDUFB7P17568 137 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PAX6P26367 422 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 EIF5AP63241 154 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SFRP4Q6FHJ7 346 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR5P2Q8WZ92 322 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 BIRC7Q96CA5 298 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 LIN37Q96GY3 246 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 LANCL2Q9NS86 450 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CHD2O14647 1828 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 DCCP43146 1447 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 C3P01024 1663 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SOCS6O14544 535 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 IFNA7P01567 189 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 GSTT2P0CG29 244 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TGFBR3Q03167 851 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TCTE1Q5JU00 501 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 MPP7Q5T2T1 576 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM184AQ6ZMB5 413 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ZSWIM9Q86XI8 627 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 GLB1L2Q8IW92 636 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SNX18Q96RF0 628 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TRIB1Q96RU8 372 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 A0A0J9YY10 115 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ACPPP15309 386 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF14P17017 642 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TAS2R38P59533 333 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ARL16Q0P5N6 197 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PTPRRQ15256 657 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 BEST3Q8N1M1 668 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SULT4A1Q9BR01 284 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SRP14P37108 136 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TNFRSF4P43489 277 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 DIO3P55073 304 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CLDN17P56750 224 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF517Q6ZMY9 492 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 GPR149Q86SP6 731 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 IRF2BP1Q8IU81 584 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PHC2Q8IXK0 858 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR1N1Q8NGS0 311 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 IFI44Q8TCB0 444 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TRAV27A0A087WT01 109 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 HTRA2O43464 458 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 LCMT2O60294 686 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 IFNA4P05014 189 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 RAB11BQ15907 218 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CST9LP1Q5W188 147 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PLEKHG7Q6ZR37 379 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 MFSD6LQ8IWD5 586 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms