RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 SNX7Q9UNH6 387 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 COL6A3P12111 3177 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 SLC30A4O14863 429 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 RDH16O75452 317 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 IFI30P13284 250 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 MPIP34949 423 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 ARL4DP49703 201 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 C21orf58P58505 322 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 STX4Q12846 297 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 PDE7AQ13946 482 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF776Q68DI1 518 aaPredicted RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 ZER1Q7Z7L7 766 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 OR5K2Q8NHB8 316 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 PHF21AQ96BD5 680 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 NEURL3Q96EH8 262 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 CNRIP1Q96F85 164 aaPredicted RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 C3orf14Q9HBI5 128 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 MOV10Q9HCE1 1003 aaKnown RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 REV1Q9UBZ9 1251 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 MRPS2Q9Y399 296 aaKnown RBP12.54□□□□□ -0.4
COL6A2-204ENST00000409416 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 PLXNB3Q9ULL4 1909 aa12.54□□□□□ -0.4
COL6A2-204ENST00000409416 A0A0A6YYC8 382 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 OR6C70A6NIJ9 312 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 I3L1I5 382 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CPNE3O75131 537 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 EFEMP2O95967 443 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CTSBP07858 339 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 PRG2P13727 222 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CRYBB2P43320 205 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 TAS2R38P59533 333 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ILF3Q12906 894 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 QPRTQ15274 297 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 IDNKQ5T6J7 187 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SLX4IPQ5VYV7 408 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 NLRP8Q86W28 1048 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 OR52P1PQ8NH57 321 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 TMEM255BQ8WV15 326 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SLC6A18Q96N87 628 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 GPA33Q99795 319 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CCDC32Q9BV29 185 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SLC22A4Q9H015 551 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 IRF2BPLQ9H1B7 796 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 NEUROD4Q9HD90 331 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 PEX12O00623 359 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 DPM1O60762 260 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SEMA3DO95025 777 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CHRM4P08173 479 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ITPKBP27987 946 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 GIPRP48546 466 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 PDX1P52945 283 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CDH11P55287 796 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 PSPHP78330 225 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 RGS1Q08116 209 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ILKQ13418 452 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 UBXN2BQ14CS0 331 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 OR5M10Q6IEU7 315 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 FBXO46Q6PJ61 603 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 PLET1Q6UQ28 207 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 FAM98AQ8NCA5 519 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SECISBP2Q96T21 854 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ATXN7L1Q9ULK2 861 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZFR2Q9UPR6 939 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 A3GALT2U3KPV4 340 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SPTA1P02549 2419 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CENPVL1A0A0U1RR11 272 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 C4orf51C9J302 202 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF670-ZNF695F2Z2N8 137 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 J3QLW9 94 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 CASC3O15234 703 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF19P17023 458 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 RPS27P42677 84 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 KCNJ5P48544 419 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SMIM11AP58511 58 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SNRPD2P62316 118 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 RHAGQ02094 409 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 PRDX1Q06830 199 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF267Q14586 743 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF79Q15937 498 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 Q6ZS52 159 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 UBQLNLQ8IYU4 475 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 ZNF582Q96NG8 517 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 RSPO3Q9BXY4 272 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
COL6A2-204ENST00000409416 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
COL6A2-204ENST00000409416 EPOPA6NHQ4 379 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 HPGDSO60760 199 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 BMP7P18075 431 aa12.52□□□□□ -0.4
COL6A2-204ENST00000409416 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms