RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 VSTM2LQ96N03 204 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 ATOH8Q96SQ7 321 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 RTN4RQ9BZR6 473 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 FBXO34Q9NWN3 711 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 XPR1Q9UBH6 696 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 PCDHA9Q9Y5H5 950 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 SNX8Q9Y5X2 465 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 AP4B1Q9Y6B7 739 aa11.44□□□□□ -0.58
CHRNA1-203ENST00000409219 C1orf226A1L170 272 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 FOXE1O00358 373 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 TP73O15350 636 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 FESP07332 822 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 CSNK2A2P19784 350 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 IL32P24001 234 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 IRF9Q00978 393 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 CALCOCO2Q13137 446 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 FASTKD3Q14CZ7 662 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 ZKSCAN8Q15776 578 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 AGBL2Q5U5Z8 902 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 MFSD12Q6NUT3 480 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 CROCCP2Q86T23 111 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 OR4N2Q8NGD1 307 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 OR52B6Q8NGF0 335 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 UBLCP1Q8WVY7 318 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 FAM168AQ92567 244 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 LRRC39Q96DD0 335 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 C1GALT1C1Q96EU7 318 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 TSPAN17Q96FV3 270 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 ADGRG7Q96K78 797 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 HBEGFQ99075 208 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 TMEM109Q9BVC6 243 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 MRPL1Q9BYD6 325 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 SAYSD1Q9NPB0 183 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 NSMCE4AQ9NXX6 385 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 FLRT3Q9NZU0 649 aa11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 MCTS1Q9ULC4 181 aaKnown RBP11.43□□□□□ -0.58
CHRNA1-203ENST00000409219 FADS1O60427 444 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 UGDHO60701 494 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 MYZAPP0CAP1 466 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 STMN1P16949 149 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 ITGA2P17301 1181 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 HNF1AP20823 631 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 GZMKP49863 264 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 DLG1Q12959 904 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 SQLEQ14534 574 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 TMEM44Q2T9K0 475 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 SFRP5Q5T4F7 317 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 AGAP6Q5VW22 663 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 TFAP2EQ6VUC0 442 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 ISCA2Q86U28 154 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 UHMK1Q8TAS1 419 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 STAG3L4Q8TBR4 150 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 HSD17B8Q92506 261 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 KLHL29Q96CT2 875 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 CNRIP1Q96F85 164 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 SERPINI1Q99574 410 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 GPR22Q99680 433 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 HDHD5Q9BXW7 423 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 POTEKPQ9BYX7 375 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 PTGES2Q9H7Z7 377 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 EML4Q9HC35 981 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 GLRX2Q9NS18 164 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 RNF11Q9Y3C5 154 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 ANGPTL3Q9Y5C1 460 aa11.42□□□□□ -0.58
CHRNA1-203ENST00000409219 TGP01266 2768 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 TCF21O43680 179 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 CXCL13O43927 109 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 KERAO60938 352 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 NTN1O95631 604 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 MTHFD2P13995 350 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 EGR1P18146 543 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 USF1P22415 310 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 MAPK12P53778 367 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 GLYR1Q49A26 553 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 ZNF628Q5EBL2 1059 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 CCNYL2Q5T2Q4 361 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 LGSNQ5TDP6 509 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 TRMT10CQ7L0Y3 403 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 BANPQ8N9N5 519 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 ZNF675Q8TD23 568 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 PROX1Q92786 737 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 ZBTB9Q96C00 473 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 MSI2Q96DH6 328 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 ADAM29Q9UKF5 820 aa11.41□□□□□ -0.58
CHRNA1-203ENST00000409219 LOC100289279A0A1B0GTE1 492 aa11.4□□□□□ -0.58
CHRNA1-203ENST00000409219 PYGBP11216 843 aa11.4□□□□□ -0.58
CHRNA1-203ENST00000409219 RAB10P61026 200 aa11.4□□□□□ -0.58
CHRNA1-203ENST00000409219 PSPHP78330 225 aa11.4□□□□□ -0.58
CHRNA1-203ENST00000409219 MRPS22P82650 360 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-203ENST00000409219 MORF4L2Q15014 288 aa11.4□□□□□ -0.58
CHRNA1-203ENST00000409219 P2RY6Q15077 328 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms