RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PCYT1AP49585 367 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 LHX2P50458 406 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF41P51814 821 aaPredicted RBP8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 PRKAG1P54619 331 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 GAS1P54826 345 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 CLDN18P56856 261 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 SPDYE7PQ495Y7 208 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 FBXW10Q5XX13 1052 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 OR5M10Q6IEU7 315 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 MFSD12Q6NUT3 480 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ZCCHC23Q6ZST2 131 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ADGRE4PQ86SQ3 457 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ZZZ3Q8IYH5 903 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 LRRC34Q8IZ02 419 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 CLHC1Q8NHS4 586 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 AGR3Q8TD06 166 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 SFXN5Q8TD22 340 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 OR5P2Q8WZ92 322 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 JADE3Q92613 823 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 NINJ1Q92982 152 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 CIDECQ96AQ7 238 aaPredicted RBP8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 TUBGCP3Q96CW5 907 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 C1GALT1C1Q96EU7 318 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 CHMP6Q96FZ7 201 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 MECRQ9BV79 373 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 POLDIP3Q9BY77 421 aaKnown RBP8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 HOXD1Q9GZZ0 328 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 UBQLN4Q9NRR5 601 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 DNAJB12Q9NXW2 375 aaKnown RBP8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ASIC5Q9NY37 505 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 CLCF1Q9UBD9 225 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF175Q9Y473 711 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 PTGDR2Q9Y5Y4 395 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 ACTL7BQ9Y614 415 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 AP4B1Q9Y6B7 739 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 TACC2O95359 2948 aa8.23□□□□□ -1.09
SNORD88A-201ENST00000408314 OTOGQ6ZRI0 2925 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 TMEM233B4DJY2 109 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 TNFRSF21O75509 655 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 SKAP2O75563 359 aaPredicted RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 CTAG2O75638 210 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 AK1P00568 194 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 TBXA2RP21731 343 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 EIF1P41567 113 aaKnown RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 DLX5P56178 289 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 C21orf58P58505 322 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 POU6F2P78424 691 aaPredicted RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 DPY19L1Q2PZI1 675 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 GRAMD1BQ3KR37 738 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 UGT3A2Q3SY77 523 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ZNF385BQ569K4 471 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 C6orf136Q5SQH8 315 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 PDSS1Q5T2R2 415 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 IL23RQ5VWK5 629 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ANKRD26P1Q6NSI1 321 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 CDC73Q6P1J9 531 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 MTERF4Q7Z6M4 381 aaKnown RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 WDR75Q8IWA0 830 aaKnown RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 UBQLNLQ8IYU4 475 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 C9orf106Q8NAJ2 232 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 VPS37AQ8NEZ2 397 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 PSMA8Q8TAA3 256 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ACTRT2Q8TDY3 377 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ADAMTS15Q8TE58 950 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 DUSP19Q8WTR2 217 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ARL8AQ96BM9 186 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ZBTB8AQ96BR9 441 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 INTS12Q96CB8 462 aaKnown RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 YIPF4Q9BSR8 244 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 RBM24Q9BX46 236 aaKnown RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 BTBD2Q9BX70 525 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ACTRT3Q9BYD9 372 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 BHLHE41Q9C0J9 482 aaPredicted RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 CLEC4MQ9H2X3 399 aaPredicted RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 PIGUQ9H490 435 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 JKAMPQ9P055 326 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 NDRG3Q9UGV2 375 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 BAIAP2L1Q9UHR4 511 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 ITGB1BP2Q9UKP3 347 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 PCDHGB4Q9UN71 923 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 RPH3AQ9Y2J0 694 aaPredicted RBP8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 RAP2CQ9Y3L5 183 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 SNX8Q9Y5X2 465 aa8.22□□□□□ -1.09
SNORD88A-201ENST00000408314 POLQO75417 2590 aa8.21□□□□□ -1.09
SNORD88A-201ENST00000408314 DOCK7Q96N67 2140 aa8.21□□□□□ -1.09
SNORD88A-201ENST00000408314 GXYLT2A0PJZ3 443 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 OR2M5A3KFT3 312 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 C7orf72A4D263 438 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 DUXAA6NLW8 204 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 A6NNC1 897 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 H3BML4 177 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 MSTNO14793 375 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CASKO14936 926 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CFLARO15519 480 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 SEC14L5O43304 696 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 ZIC3O60481 467 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms