RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ZNF221Q9UK13 617 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MKL2Q9ULH7 1088 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SIT1Q9Y3P8 196 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 KCNE1BA0A087WTH5 132 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1W2PPC4 97 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 A0A1W2PQ72 361 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 POM121BA6NF01 834 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 A6NIZ1 184 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GAPDHSO14556 408 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TFECO14948 347 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 VILLO15195 856 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 KIAA0513O60268 411 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 FMO6PO60774 539 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 LDB3O75112 727 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MOSPD3O75425 235 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CKMT1AP12532 417 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TRHRP34981 398 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 BSGP35613 385 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TRIM23P36406 574 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 DAPP51397 102 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MAZP56270 477 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 C21orf58P58505 322 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RAP1BP61224 184 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RPS3AP61247 264 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RAP1AP62834 184 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MLC1Q15049 377 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SEC23BQ15437 767 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 NNATQ16517 81 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PGGHGQ32M88 737 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ENTPD8Q5MY95 495 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 C1orf189Q5VU69 101 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 KDM4DQ6B0I6 523 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 WBP2NLQ6ICG8 309 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 KIAA1211LQ6NV74 962 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 FAM180BQ6P0A1 224 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ZC3H14Q6PJT7 736 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ATG14Q6ZNE5 492 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 QSOX2Q6ZRP7 698 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ZNF227Q86WZ6 799 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MISPQ8IVT2 679 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 UBALD2Q8IYN6 164 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MEIOBQ8N635 442 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GATSQ8NAP1 163 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TP53I13Q8NBR0 393 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 UXS1Q8NBZ7 420 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 OR2A1Q8NGT9 310 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GOT1L1Q8NHS2 421 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 C1orf216Q8TAB5 229 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 NEIL3Q8TAT5 605 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 BAHD1Q8TBE0 780 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TMEM163Q8TC26 289 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 NT5CQ8TCD5 201 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PPP1R14AQ96A00 147 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 COX14Q96I36 57 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC6A18Q96N87 628 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SLC46A1Q96NT5 459 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GABRG3Q99928 467 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TTYH2Q9BSA4 534 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CRB3Q9BUF7 120 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 MKRN2Q9H000 416 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SAP130Q9H0E3 1048 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 TMEM138Q9NPI0 162 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RXFP3Q9NSD7 469 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CENPMQ9NSP4 180 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 NDUFAF4Q9P032 175 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 B4GALT7Q9UBV7 327 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 FBXO9Q9UK97 447 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SPATA2Q9UM82 520 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 DAPP1Q9UN19 280 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PPIEQ9UNP9 301 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 C19orf53Q9UNZ5 99 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 YBX2Q9Y2T7 364 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PLEKHM1Q9Y4G2 1056 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 FKBP7Q9Y680 259 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CEPT1Q9Y6K0 416 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SHROOM3Q8TF72 1996 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CLDN24A6NM45 220 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PCDH17O14917 1159 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 LINC01565O15544 149 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 LRRTM2O43300 516 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 BCAS1O75363 584 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RGS9O75916 674 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 IGHEP01854 428 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 APOC1P02654 83 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 THBS1P07996 1170 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GNAO1P09471 354 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ADORA3P0DMS8 318 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 PRKCAP17252 672 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 FUT1P19526 365 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CHMP24386 653 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 HSD11B1P28845 292 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 S100GP29377 79 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 CD40LGP29965 261 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GRK5P34947 590 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 ALDH3B2P48448 385 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 NR0B1P51843 470 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 RHAGQ02094 409 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 GAB1Q13480 694 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 OR1Q1Q15612 314 aa4.44□□□□□ -1.7
PCDH11X-207ENST00000406881 SGCBQ16585 318 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms