RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 OMPP47874 163 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 MLLT1Q03111 559 aaPredicted RBP22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 AQP6Q13520 282 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 NR1D2Q14995 579 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 SPCS2Q15005 226 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 RASSF6Q6ZTQ3 369 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 MBOAT2Q6ZWT7 520 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 DEFB123Q8N688 67 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 C9orf43Q8TAL5 461 aaPredicted RBP22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 CNPPD1Q9BV87 410 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 POLDIP3Q9BY77 421 aaKnown RBP22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 MAU2Q9Y6X3 613 aa22.89■■□□□ 1.26
DNMT3A-206ENST00000406659 TRAPPC13A5PLN9 417 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 HRKO00198 91 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 PRAMEF2O60811 474 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 CNOT3O75175 753 aaKnown RBP22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 GKN3PP0CG01 181 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 ATXN8OSP0DMR3 200 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 PRG2P13727 222 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 STAT5AP42229 794 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 PCYT1AP49585 367 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 RGS19P49795 217 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 RNF144AP50876 292 aaPredicted RBP22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 PGDP52209 483 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 PSG6Q00889 435 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 OCA2Q04671 838 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 OCLNQ16625 522 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 AP1ARQ63HQ0 302 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 ACSM5Q6NUN0 579 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 TSSK4Q6SA08 328 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 ZAR1Q86SH2 424 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 ZNF578Q96N58 590 aaPredicted RBP22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 YIPF2Q9BWQ6 316 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 EGLN3Q9H6Z9 239 aa22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 KRCC1Q9NPI7 259 aaPredicted RBP22.89■■□□□ 1.25
DNMT3A-206ENST00000406659 SLC22A1O15245 554 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 PIPP12273 146 aaPredicted RBP22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 CD36P16671 472 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 SLC15A1P46059 708 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 DHPSP49366 369 aaPredicted RBP22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 ARRB1P49407 418 aaPredicted RBP22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 GPLD1P80108 840 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 SERTAD2Q14140 314 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 IRF3Q14653 427 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 TIGD6Q17RP2 521 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 PLAG1Q6DJT9 500 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 TTLL10Q6ZVT0 673 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 TMEM255BQ8WV15 326 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 VSTM2LQ96N03 204 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 PELOQ9BRX2 385 aaKnown RBP22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 CDCA4Q9BXL8 241 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 DSN1Q9H410 356 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 NECTIN3Q9NQS3 549 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 NLGN3Q9NZ94 848 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 RPL36Q9Y3U8 105 aaKnown RBP22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 CLDN16Q9Y5I7 305 aa22.88■■□□□ 1.25
DNMT3A-206ENST00000406659 TLX2O43763 284 aaPredicted RBP22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 GUSBP08236 651 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 ALAS2P22557 587 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 FPR3P25089 353 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 CFHR1Q03591 330 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 BIKQ13323 160 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 OR1Q1Q15612 314 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 LYSMD4Q5XG99 296 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 NRMQ8IXM6 262 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 FAM26EQ8N5C1 309 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 ELF4Q99607 663 aaPredicted RBP22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 EVA1AQ9H8M9 152 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 ERVK-19Q9WJR5 959 aa22.87■■□□□ 1.25
DNMT3A-206ENST00000406659 PRKYO43930 277 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 FMO6PO60774 539 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 MYF5P13349 255 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 GNSP15586 552 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 TGFBR2P37173 567 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 SNAPC1Q16533 368 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 MFSD4BQ5TF39 518 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 MEDAGQ5VYS4 303 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 SLC27A4Q6P1M0 643 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 PLA2G12AQ9BZM1 189 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 GIMD1P0DJR0 217 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 ADORA3P0DMS8 318 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 HTR2AP28223 471 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 PDZK1Q5T2W1 519 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 ZNF614Q8N883 585 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 OR4N2Q8NGD1 307 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 TBC1D15Q8TC07 691 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 TSSK6Q9BXA6 273 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 Q9N2J8 555 aa22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 TESQ9UGI8 421 aaKnown RBP22.86■■□□□ 1.25
DNMT3A-206ENST00000406659 A8MU76 341 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 M0R082 166 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 PIP5K1CO60331 668 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 PTHP01270 115 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 GALNSP34059 522 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 GPR4P46093 362 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 LSM3P62310 102 aaKnown RBP22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 FUT7Q11130 342 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 DCTN2Q13561 401 aaKnown RBP22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 SLC25A30Q5SVS4 291 aa22.85■■□□□ 1.25
DNMT3A-206ENST00000406659 MAMSTRQ6ZN01 415 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms