RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 SDF2Q99470 211 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 TBL1XR1Q9BZK7 514 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 PAIP1Q9H074 479 aaKnown RBP13.3□□□□□ -0.28
CDPF1-203ENST00000404583 LDAHQ9H6V9 325 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 EXO5Q9H790 373 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 TMEM45AQ9NWC5 275 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 QPCTLQ9NXS2 382 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 PPP4R1LQ9P1A2 415 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 SH3BGRL2Q9UJC5 107 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 ZNF835Q9Y2P0 537 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 PCDHB14Q9Y5E9 798 aa13.3□□□□□ -0.28
CDPF1-203ENST00000404583 DIDO1Q9BTC0 2240 aaKnown RBP13.29□□□□□ -0.28
CDPF1-203ENST00000404583 TRGV5A0A0B4J1U4 118 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 TRGV8A0A0C4DH27 118 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 SEMA7AO75326 666 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 CBR3O75828 277 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 STSP08842 583 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 ATP6V1C1P21283 382 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 TBXA2RP21731 343 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 PTGS2P35354 604 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 ARHGAP11BQ3KRB8 267 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 C1QL3Q5VWW1 255 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 C16orf62Q7Z3J2 963 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 GATSQ8NAP1 163 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
CDPF1-203ENST00000404583 C10orf82Q8WW14 230 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 AURKBQ96GD4 344 aaPredicted RBP13.29□□□□□ -0.28
CDPF1-203ENST00000404583 SLC6A15Q9H2J7 730 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 DSN1Q9H410 356 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 TPT1P8Q9HAU6 139 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 ACKR4Q9NPB9 350 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 UBQLN4Q9NRR5 601 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 EXD2Q9NVH0 621 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 MED11Q9P086 117 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 MAST4O15021 2626 aa13.29□□□□□ -0.28
CDPF1-203ENST00000404583 UTP20O75691 2785 aaKnown RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 A0A1W2PP18 115 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 PRAMEF27A3QJZ7 478 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 ALG1L2C9J202 215 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 HMGN4O00479 90 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 SCDO00767 359 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 SUSD5O60279 629 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 FCMRO60667 390 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 KRT75O95678 551 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 HPNP05981 417 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 NGFRP08138 427 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 HPGDP15428 266 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 LCN1P31025 176 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 LSP1P33241 339 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 KHKP50053 298 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 C3AR1Q16581 482 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 EIPR1Q53HC9 387 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 WIPI1Q5MNZ9 446 aaPredicted RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 HEPHL1Q6MZM0 1159 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 Q6ZPB1 254 aaPredicted RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 YRDCQ86U90 279 aaKnown RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 FAM83FQ8NEG4 500 aaPredicted RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 NEIL3Q8TAT5 605 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 SDHAF3Q9NRP4 125 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 ERRFI1Q9UJM3 462 aaPredicted RBP13.28□□□□□ -0.28
CDPF1-203ENST00000404583 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
CDPF1-203ENST00000404583 A0A096LPI6 279 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 AQP7O14520 342 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 LRRTM2O43300 516 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 NDUFB5O43674 189 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 GMFGO60234 142 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 HCN1O60741 890 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 STX11O75558 287 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 AGR2O95994 175 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 AK1P00568 194 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 TPOP07202 933 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 HOXB9P17482 250 aaPredicted RBP13.27□□□□□ -0.29
CDPF1-203ENST00000404583 DCTP40126 519 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 CA7P43166 264 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 RNF144AP50876 292 aaPredicted RBP13.27□□□□□ -0.29
CDPF1-203ENST00000404583 MVDP53602 400 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 ATP12AP54707 1039 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 GNGT1P63211 74 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 C17orf67Q0P5P2 114 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 FUT5Q11128 374 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 UBAP2LQ14157 1087 aaKnown RBP13.27□□□□□ -0.29
CDPF1-203ENST00000404583 GPR68Q15743 365 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 C4orf17Q53FE4 359 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDPF1-203ENST00000404583 ATAD3BQ5T9A4 648 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 FJX1Q86VR8 437 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 FADS6Q8N9I5 356 aa13.27□□□□□ -0.29
CDPF1-203ENST00000404583 OR2M3Q8NG83 312 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms