RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HCAR1Q9BXC0 346 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 UBXN6Q9BZV1 441 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 RAB18Q9NP72 206 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 MIEF1Q9NQG6 463 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 FARSBQ9NSD9 589 aaKnown RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 CUTCQ9NTM9 273 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 FAM120CQ9NX05 1096 aaKnown RBP3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 RSPH14Q9UHP6 348 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 ANAPC7Q9UJX3 599 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 SNX6Q9UNH7 406 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 CACNA1FO60840 1977 aa3.01□□□□□ -1.93
HMGB1P17-201ENST00000403495 A0A087WWV3 80 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 SAGE2PA6NJ88 616 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 A8MUI8 341 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 B3GAT3O94766 335 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 F10P00742 488 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 IGF1P05019 195 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 UGT2B4P06133 528 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 IQCF3P0C7M6 154 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 CPN1P15169 458 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ALDH3B2P48448 385 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ACADVLP49748 655 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 METAP1P53582 386 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 RPL8P62917 257 aaKnown RBP3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ST3GAL3Q11203 375 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 PDK4Q16654 411 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 MICAQ29983 383 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 SLC36A3Q495N2 470 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 FAM120AOSQ5T036 256 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 LGSNQ5TDP6 509 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 PYHIN1Q6K0P9 492 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ACSM5Q6NUN0 579 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZNF600Q6ZNG1 722 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 BPIFB2Q8N4F0 458 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 DENND6BQ8NEG7 585 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 BEST4Q8NFU0 473 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 C9orf85Q96MD7 179 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 RMND5AQ9H871 391 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ELOVL3Q9HB03 270 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 CLEC5AQ9NY25 188 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZNF581Q9P0T4 197 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 TBK1Q9UHD2 729 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 SMC3Q9UQE7 1217 aa3□□□□□ -1.93
HMGB1P17-201ENST00000403495 K7EQM0 130 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 CTAGE5O15320 804 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZSCAN12O43309 604 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 MAGEA9P43362 315 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 RGS4P49798 205 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 NTHL1P78549 312 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 CXCL6P80162 114 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 CUL1Q13616 776 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 TIMM50Q3ZCQ8 353 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 GGTA1PQ4G0N0 100 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 CYBRD1Q53TN4 286 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 STAC2Q6ZMT1 411 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 GCNT7Q6ZNI0 430 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 HPS6Q86YV9 775 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 TBC1D21Q8IYX1 336 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 LRRC43Q8N309 656 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR2T3Q8NH03 318 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 SPATA3Q8NHX4 192 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 VN1R17PQ8TDU5 208 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 AGAP11Q8TF27 550 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 ARNTL2Q8WYA1 636 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 CTNNBL1Q8WYA6 563 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 PPP1R16AQ96I34 528 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 NOL4LQ96MY1 436 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZNF607Q96SK3 696 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 APOL2Q9BQE5 337 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 ALG12Q9BV10 488 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 RPS10P5Q9NQ39 176 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 GSTK1Q9Y2Q3 226 aa2.99□□□□□ -1.93
HMGB1P17-201ENST00000403495 GRIN2DO15399 1336 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 A0A1W2PQ72 361 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 A8MX80 341 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ANGPT2O15123 496 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 LATO43561 262 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GMFGO60234 142 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GPRIN2O60269 458 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 TSC22D2O75157 780 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 IDH1O75874 414 aaKnown RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 MFN2O95140 757 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 CA1P00915 261 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 IGHDP01880 384 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 SNRPCP09234 159 aaKnown RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 CT45A10P0DMU9 189 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 PCMT1P22061 227 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 IGFBP5P24593 272 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 HTR2AP28223 471 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 CDH5P33151 784 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GNPDA1P46926 289 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 HNMTP50135 292 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 PLA2G16P53816 162 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZNF154Q13106 437 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 DPYSL3Q14195 570 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 SELPLGQ14242 412 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ATXN7L3Q14CW9 347 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ATF7IP2Q5U623 682 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms