RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 STX11O75558 287 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 CPEP16870 476 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 RPS4Y1P22090 263 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 SEPHS1P49903 392 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 WNT4P56705 351 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 VSX2P58304 361 aaPredicted RBP15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 PRICKLE4Q2TBC4 344 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 TAF8Q7Z7C8 310 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 CCDC190Q86UF4 302 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 LSRQ86X29 649 aaPredicted RBP15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 CADM3Q8N126 398 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 CA13Q8N1Q1 262 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 CDRT4Q8N9R6 151 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 DUSP22Q9NRW4 184 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 MAT2BQ9NZL9 334 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 CRNNQ9UBG3 495 aaPredicted RBP15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 KCNE5Q9UJ90 142 aa15.78■□□□□ 0.12
DNMT3A-205ENST00000402667 TMEM129A0AVI4 362 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 OR5K4A6NMS3 321 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 SURF4O15260 269 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 DBIP07108 87 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 CT62P0C5K7 136 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 PRG2P13727 222 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 PTNP21246 168 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 MGAT2Q10469 447 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 EXOSC7Q15024 291 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 SPANXN2Q5MJ10 180 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 AGAP7PQ5VUJ5 663 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 KIAA0895LQ68EN5 471 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 ZNF620Q6ZNG0 422 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 COX18Q8N8Q8 333 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 TM9SF4Q92544 642 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 PRSS27Q9BQR3 290 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 SATB2Q9UPW6 733 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 PCDHGB6Q9Y5F9 930 aa15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 SPIN1Q9Y657 262 aaPredicted RBP15.77■□□□□ 0.12
DNMT3A-205ENST00000402667 NPIPA5A0A0B4J1W7 369 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 SPTY2D1-AS1A0A0U1RR47 76 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 PNMA8CA0A1B0GUJ8 204 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 C2CD4DB7Z1M9 353 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 NPIPA7E9PJI5 369 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 PEX12O00623 359 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 CDC42EP2O14613 210 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 GKN3PP0CG01 181 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 NPIPA8P0DM63 369 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 BNC1Q01954 994 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 C1orf61Q13536 156 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 FZD2Q14332 565 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 MRPL2Q5T653 305 aaKnown RBP15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 AADACL4Q5VUY2 407 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 SHFQ7M4L6 423 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 RANBP3LQ86VV4 465 aaPredicted RBP15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 GPR151Q8TDV0 419 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 GATAD2BQ8WXI9 593 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 TOE1Q96GM8 510 aaKnown RBP15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 STACQ99469 402 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 SIAEQ9HAT2 523 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 SNTG1Q9NSN8 517 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 IL20RAQ9UHF4 553 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 ZNF229Q9UJW7 825 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 CYP8B1Q9UNU6 501 aa15.77■□□□□ 0.11
DNMT3A-205ENST00000402667 SGK494L7N484 410 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 NID1P14543 1247 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 TYRP1P17643 537 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 HTR2AP28223 471 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 RORCP51449 518 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CCR5P51681 352 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CDH11P55287 796 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 PGGHGQ32M88 737 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 ZCCHC12Q6PEW1 402 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 FIGNL1Q6PIW4 674 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 LAPTM4BQ86VI4 370 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 POC5Q8NA72 575 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 TMEM203Q969S6 136 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 ANKRD9Q96BM1 317 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 NELL2Q99435 816 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 GAS2L1Q99501 681 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CCDC3Q9BQI4 270 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 TEX12Q9BXU0 123 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 SP140LQ9H930 580 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 SMURF1Q9HCE7 757 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 FAM60AQ9NP50 221 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 TXNL4BQ9NX01 149 aaKnown RBP15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CAB39Q9Y376 341 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 EXOSC1Q9Y3B2 195 aaKnown RBP15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CDH10Q9Y6N8 788 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 TRAPPC13A5PLN9 417 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 OR5K3A6NET4 321 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 PLD2O14939 933 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 TSPAN19P0C672 248 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 LIMS3P0CW19 117 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 LIMS4P0CW20 117 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 THEGLP0DJG4 465 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 MAP3K8P41279 467 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 RNF144AP50876 292 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CDC20Q12834 499 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 OOSP2Q86WS3 158 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 RFKQ969G6 155 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CTHRC1Q96CG8 243 aa15.76■□□□□ 0.11
DNMT3A-205ENST00000402667 CEP19Q96LK0 163 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms